Pairwise Alignments

Query, 347 a.a., Pyocin R2_PP, tail formation from Pseudomonas putida KT2440

Subject, 480 a.a., phage late control gene D protein GPD from Synechococcus elongatus PCC 7942

 Score =  153 bits (387), Expect = 8e-42
 Identities = 112/350 (32%), Positives = 174/350 (49%), Gaps = 18/350 (5%)

Query: 2   KPTYQIVADGSDITALINDRLLLLRTSDKPGMESDEFELRIDDRDQAVALPARGSNVVVM 61
           KP Y + ADG +IT  I DRLL L   D+    SD  E+ +DDRD+ + +P  G+ + V 
Sbjct: 3   KPAYLVEADGVNITKQIADRLLSLTVVDEAEQLSDRVEIVLDDRDKLLEIPKSGTWLKVY 62

Query: 62  MGY-EGQGL-TRLGAYTVDEVELSGPPDTIVIRGKASDMRGSGKTVRSGSWENVPLSQIV 119
           +GY EG  L   +G Y VD++ LS  P ++V+R  A +   + K  R+ SW +  L +I 
Sbjct: 63  LGYAEGGKLPVYMGTYAVDDLTLSNGPRSMVVRATALETAPAMKDSRTQSWHDTTLGEIA 122

Query: 120 GEIAKRNGWEVSCPVDT---KVERVDQRNESDYNFVTRLAKQYDCTAKVAESKLLVMPRQ 176
             IA R+G E+    D     ++  DQ  ESD  F+TRLA++   TAK  +  L +  R 
Sbjct: 123 RTIASRSGLELRIVGDVGSIPIKHEDQTAESDIAFLTRLARRLKITAKPIDKALWITRRA 182

Query: 177 GG-QSTTGKALAVVTINKTYVSRYQFRLGDRNSQKAVKTQH--QDPKTGKLQVVELANDE 233
               +T G  LA   +    VS ++  + +R +   VK ++  QD K  KL  V      
Sbjct: 183 SDIPATPGVELAQRIVKGDEVSDWRATIKNRGAYSRVKARYFDQDEKKEKLLTV-----G 237

Query: 234 SPDGLPPVHTDRHVYPNKTSAQQAAKARLAAFNRSTAGVRLEMPGRTDLFAERSINAQGF 293
             DG      ++ +Y  +  AQ+AA +RL +       +   M G  +  AE  +  Q F
Sbjct: 238 PEDGNLQTFEEKQLYKTRDEAQRAADSRLQSLQSGEVTIDFSMEGDPEFTAEGQVTLQDF 297

Query: 294 KPGLDGEYLVDGVEQVFTQSGWTTTVECNGGKKGKAK---ASGKKKKDTK 340
           +  +DG + +  V   F  +G+ TTV C  G KG+A    ++G+ + D +
Sbjct: 298 RALVDGTWYIRNVTHKFDGNGYRTTVTC--GTKGEANNDWSAGRGENDKR 345