Pairwise Alignments

Query, 347 a.a., Pyocin R2_PP, tail formation from Pseudomonas putida KT2440

Subject, 335 a.a., phage late control gene D protein (GPD) from Phaeobacter inhibens DSM 17395

 Score =  147 bits (372), Expect = 3e-40
 Identities = 101/330 (30%), Positives = 167/330 (50%), Gaps = 19/330 (5%)

Query: 2   KPTYQIVADGSDITALINDRLLLLRTSDKPGMESDEFELRIDDRDQ--AVALPARGSNVV 59
           +P +++  DG DI++ +  RL+ L  +D  G++SD  ++ + D      +A P  G+ + 
Sbjct: 7   RPFFRVEVDGKDISSTLAPRLISLSLTDAAGVQSDNVQITLSDTTLFGRLAEPKAGAEIR 66

Query: 60  VMMGYEGQGLTRLGAYTVDEVELSGPPDTIVIRGKAS--DMRGSGKTV----RSGSWEN- 112
           V +GY  Q L  +G +  D V + GPPD + I G AS      SGKT     +  SW + 
Sbjct: 67  VWLGYPFQ-LKYMGLFIADNVIVGGPPDQMTITGIASVNGETSSGKTALTDQKKRSWPSG 125

Query: 113 VPLSQIVGEIAKRNGWEVSCP---VDTKVERVDQRNESDYNFVTRLAKQYDCTAKVAESK 169
             +S +V +IA  +G E +         +  +DQ +ESD N ++R+A+ +D  AK    +
Sbjct: 126 TTISALVQKIAGEHGLEHAVSESLAKVALSHIDQIDESDINLLSRIARDHDAIAKPGNGR 185

Query: 170 LLVMPRQGGQSTTGKALAVVTINKTYVSRYQFRLGDRNSQKAVKTQHQDPKTGKLQVVEL 229
           L++  R    + +G  + V++I    +SR+Q++   R    +V   +QD   GK   VE 
Sbjct: 186 LIMAKRGESLTASGAPMPVLSITPKKISRWQYQNSTREKAGSVVAVYQDHGKGKS--VEC 243

Query: 230 ANDESPDGLPPVHTDRHVYPNKTSAQQAAKARLAAFNRSTAGVRLEMPGRTDLFAERSIN 289
              E   G P     R  +PNK +A+QAA + L    R+  G+ + MPG  D  AE  ++
Sbjct: 244 IAGE---GEPKQRLKRR-FPNKDAAEQAAASELQRLKRAGRGLSVTMPGDPDAMAEAKLS 299

Query: 290 AQGFKPGLDGEYLVDGVEQVFTQSGWTTTV 319
           A GF+  +DGE+L+   E      G+ T +
Sbjct: 300 AAGFRSYVDGEWLITKAEHSLDSGGYRTAI 329