Pairwise Alignments

Query, 1089 a.a., putative Pyocin R2_PP, tail length determination protein from Pseudomonas putida KT2440

Subject, 646 a.a., hypothetical protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  142 bits (359), Expect = 6e-38
 Identities = 149/591 (25%), Positives = 253/591 (42%), Gaps = 49/591 (8%)

Query: 50  TIKLREEW----KRAHDS------GAAGADKLLRKLDSNLDSLRKQGIEVGKLGREYQRL 99
           T++LR++     KRA D        A  A + L +  ++ D +R  G+  G      +++
Sbjct: 9   TLRLRDQMGRYTKRALDDVTRATGDATTAARGLARAGADTDRMRFGGLLNG-----LRQV 63

Query: 100 GREARAADLQLKGHQQLQAGKESLKSNIGRAVVATGAAAVPTMISA-NYQAIIRDIAIKA 158
            R +RAA   L+G     +        +G  + A G  A   +    +Y+  +  +A  A
Sbjct: 64  DRLSRAAMQSLRGVASAASNAAKAAGQVGSGLAAGGYVAGRALAKPMDYERRVAQMANTA 123

Query: 159 ----DIANKPEEQ-QLTRTVIGTAKDTGMSRNDVADLVNQLVGAG-MDLDKALSYAPVAA 212
               D+A +     QL  ++ G  +  G +R++ A+ +++++ +G +  D A S  PV  
Sbjct: 124 YAERDVAGRRAGMTQLDASITGAVRTGGGTRDEAAEALDKMLASGAIKADAATSLLPVLQ 183

Query: 213 KFAVGQGASGVDTASM-IQALEQNAKISDPKVMQQALEAIAYQGQAGSFEASDMAKWFPQ 271
           K++   GA+  D A + I+ ++Q      P+  Q AL+     GQ G FE  DMA+W PQ
Sbjct: 184 KYSTASGAASGDLADIVIRGVQQG--FFKPEEAQAALDRAMVAGQMGGFELKDMARWLPQ 241

Query: 272 LLAGMEKNGITGLDAVTSLGSMLQVQMKTAGSSDEAANNFKNWMEKIGAGDIKKAYSDVG 331
           ++A  +  G+ G+     + +  Q    TAG+ D+A NN  N + K+ + D    +  +G
Sbjct: 242 MMANAQ--GMKGMSGFERILASAQASAVTAGNKDQAGNNLVNLLAKMNSSDAALDFKKLG 299

Query: 332 IDYQASLNTGLQKGMNVIEASMALAMRYVEKTDPAKAKQIKDAQAKIDKEVDPEKAKAAL 391
           ID   SL    + G    E  +   +R VE     + K+ + A+AK       ++A A  
Sbjct: 300 IDLSGSLAKARENG----ELPLDAFIRLVETRVVGRDKRFQAARAKAAGATGGDRASALN 355

Query: 392 EALE--KTLRTGDIFADMQVKAALTAYGQNRGLYEELKADSKKASGILDKNLAERRETSA 449
           +  +  +    G +  D Q   AL A    +G   ++    + A+G  +        TSA
Sbjct: 356 DMADILQASAVGRVMQDRQALLALVAEMTQKGYVADVLGGMRNATGAGETAFGVVASTSA 415

Query: 450 QQWAELGQAVDDSMRSIGDAIRPATDMAAQGLTKVAHGITSLSDQFPSIAMGIGGITAAV 509
            +  +     D +   +   ++P  D A + L        +L+      A  IG +TAA 
Sbjct: 416 FKAQQASNEKDIAASGMLAHVKPYLDPAMERLAAFGAEFPALTTAAMEAATAIGAMTAAA 475

Query: 510 IAFLSARSALRVGRGVFNIAMGRGLEGFAGRAGKAERAPIKLPKTGSKVVDTGLGLLGKV 569
            AF      LR+  G      G G  G  G AG A R   +  K   ++     GLL   
Sbjct: 476 AAF----GGLRMLTG------GAGAAGAGGAAGAAGRG-ARFGKLAGRLAGRAGGLLAVA 524

Query: 570 FSAGSKGAAQADDPGAAANDTQRVFVVNADAIGG--IGSSV-ANSGPARGS 617
            +A    A   +  G + ND     V  A  +GG   G+S+ A +G A G+
Sbjct: 525 GAAYDVYA--TEQSGMSRNDKNAAHVATAGGLGGTLAGASLGAKAGAALGT 573