Pairwise Alignments

Query, 387 a.a., putative ClpP protease from Pseudomonas putida KT2440

Subject, 284 a.a., ClpP protease family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 77.8 bits (190), Expect = 4e-19
 Identities = 71/235 (30%), Positives = 115/235 (48%), Gaps = 24/235 (10%)

Query: 17  PQVEDRHWYSIAAATEGDADSKVIEVYVYGEIGA-W---GITANQFIQDLKAIDDGTSPI 72
           P+ ++    +I AA E    +    + VYG IG  W   G+T  +    L++I +    +
Sbjct: 18  PRAQELWNPAIKAAVENTEST----ITVYGIIGEDWYGEGVTLKRIDAALRSIGN-EKDV 72

Query: 73  VVAFNTNGGDLFEGLAIHNALSRLGERCTGRVDALAASAGSVAVCGAH--RVVMASNAML 130
            V  N+ GGD+FEG+AI+N L     + T +V  LAASA SV           +AS+A L
Sbjct: 73  TVYINSPGGDMFEGIAIYNRLREHKGKVTTKVLGLAASAASVIYMAGEDDARFVASSAFL 132

Query: 131 MIHNPYTWVGGDAEDLRRVADVLDQAFEAMIAAYKAKAPNIDDAELRRLVNAESWLTASE 190
           MIHN + +  G+   LR +AD +++   AM+  Y  +     +  +  +++ E+++   +
Sbjct: 133 MIHNCWVFAIGNRHALRNIADDMEEFDAAMVDLY-VEGCGQSEKVIATMMDEETFIRGKK 191

Query: 191 AVALGL------ADEVG---NGVKVQACLGQGAAMARY---RNTPQALLDQLKAS 233
           AV LG       ADE+G         +     AAMA+    R+  + LL  LK+S
Sbjct: 192 AVELGFAADTLSADEIGETTENTNANSLRKVDAAMAKAGVPRSERRQLLQDLKSS 246