Pairwise Alignments

Query, 272 a.a., shikimate dehydrogenase-related enzyme from Pseudomonas putida KT2440

Subject, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

 Score =  217 bits (553), Expect = 2e-61
 Identities = 118/274 (43%), Positives = 172/274 (62%), Gaps = 8/274 (2%)

Query: 3   DRYAVIGRPINHTKSPLIHGLFAQASNQQLEYGAIEGSLDDFEAQVLQFRSEGGKGMNIT 62
           D+YAV G PINH+KSP IH LFA+ + Q + Y A    +D F      F ++GG+G N+T
Sbjct: 6   DQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVT 65

Query: 63  APFKLRAFELADRRSERAQLARAANALK-FEDGRIVAENFDGIGLLRDIEENLGEP--LR 119
            PFK  A+  ADR +ERA+LA A N LK  +DG I+ +N DG GL++D+   L +   L+
Sbjct: 66  VPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDL---LAQQVLLK 122

Query: 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD-HSRLRISRYEALE 178
              +LL+GAGGA RG L P L   P+ + + NR  AKA  L   +  +  ++   +E L+
Sbjct: 123 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLK 182

Query: 179 GQSFDIVVNATSASLTADLPPLPADVLGEAALAYELAYGKGLTPFLRLAREQGQARLADG 238
            QS+D+++N+TSASL  +LP +   +    ++ Y++ YGKG T F + AR+ G A+  DG
Sbjct: 183 -QSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAIDG 241

Query: 239 VGMLVEQAAEAFAWWRGVRPDTRAVINQLTIPLE 272
           +GMLV QAAE+F  WRG+RP T+ ++ +L   LE
Sbjct: 242 LGMLVGQAAESFMLWRGLRPGTKQILRELRKNLE 275