Pairwise Alignments

Query, 272 a.a., shikimate dehydrogenase-related enzyme from Pseudomonas putida KT2440

Subject, 278 a.a., shikimate dehydrogenase (RefSeq) from Shewanella amazonensis SB2B

 Score =  211 bits (537), Expect = 1e-59
 Identities = 120/268 (44%), Positives = 166/268 (61%), Gaps = 4/268 (1%)

Query: 1   MSDRYAVIGRPINHTKSPLIHGLFAQASNQQLEYGAIEGSLDDFEAQVLQFRSEGGKGMN 60
           M+DR+AV G PI+H+KSP IH +FA+ + Q L Y AI   LD F   V  F + GG G N
Sbjct: 6   MTDRFAVFGNPISHSKSPQIHAMFAKETGQTLTYEAILAPLDGFAEAVTAFMAAGGCGAN 65

Query: 61  ITAPFKLRAFELADRRSERAQLARAANAL-KFEDGRIVAENFDGIGLLRDIEENLGEPLR 119
           +T PFK +AF L D  S+ A++A A N L K  DGR+  +N DG+GL+ D+  + G  L 
Sbjct: 66  VTVPFKEQAFTLCDELSDDARIAGAVNTLIKLPDGRLRGDNTDGMGLVADLIRH-GVELN 124

Query: 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEG 179
           N+RVLL+GAGGA RGALLP ++AG ++L I+NR ++KA AL        + +     +  
Sbjct: 125 NKRVLLVGAGGAARGALLPLVRAG-AKLTISNRTLSKAEALAALCPKVNVEVISGSHIR- 182

Query: 180 QSFDIVVNATSASLTADLPPLPADVLGEAALAYELAYGKGLTPFLRLAREQGQARLADGV 239
             FD+++N+TSASL+ DLP + A+ +    + Y++ YG   T F   AR  G     DG+
Sbjct: 183 SPFDVIINSTSASLSGDLPVIAANAIDNQTVCYDMMYGAKPTVFNEWARSLGAKICIDGL 242

Query: 240 GMLVEQAAEAFAWWRGVRPDTRAVINQL 267
           GMLV QAAE+F  WR VRP+   V+  L
Sbjct: 243 GMLVGQAAESFYLWRRVRPNAAPVLQTL 270