Pairwise Alignments

Query, 301 a.a., Tn4652, transposase subunit B from Pseudomonas putida KT2440

Subject, 328 a.a., Probable transposase from Mycobacterium tuberculosis H37Rv

 Score =  310 bits (795), Expect = 2e-89
 Identities = 161/287 (56%), Positives = 195/287 (67%), Gaps = 14/287 (4%)

Query: 13  FGVEPLCRVLQ-----VSPSAYRRHAARLRDRSRRSARAIRDEELAVQIHRVWQENYEVY 67
           +GVE +C  L      ++PS Y  H  R       S R +RD EL   I RV   NY VY
Sbjct: 37  WGVESICTQLTELGVPIAPSTYYDHINR-----EPSRRELRDGELKEHISRVHAANYGVY 91

Query: 68  GARKVWRQMHREHQVVARCTVERLMREMGLCGVTRGKTVKTTQPDPDNANPRDLVKRQFT 127
           GARKVW  ++RE   VARCTVERLM ++GL G TRGK  +TT  DP  A P DLV+R+F 
Sbjct: 92  GARKVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFG 151

Query: 128 AERPNQLWVADFTFVSTWQGFAYVAFIVDVYSRFIVGWRVSRHMRTEFVLDALEQALHTR 187
              PN+LWVAD T+VSTW GFAYVAF+ D Y+R I+GWRV+  M T  VLDA+EQA+ TR
Sbjct: 152 PPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTR 211

Query: 188 RPEP----HRLVHHSDRGSQYLSIRYSERLGEAGIEPSVGNTGDSYDNALAETINGLYKT 243
           + E       ++HH+DRGSQY SIR+SERL EAGI+PSVG  G SYDNALAETINGLYKT
Sbjct: 212 QQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKT 271

Query: 244 ELIHKRGPWKSVDSLEWETLKWVTWFNHQRLLEPIGNRPPAEFEALY 290
           ELI    PW+S++ +E  T +WV WFNH+RL +  G+ PP E EA Y
Sbjct: 272 ELIKPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAY 318