Pairwise Alignments

Query, 377 a.a., putative nickel/cobalt transporter, high-affinity from Pseudomonas putida KT2440

Subject, 318 a.a., high-affinity nickel-transporter (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 60.1 bits (144), Expect = 8e-14
 Identities = 52/162 (32%), Positives = 71/162 (43%), Gaps = 34/162 (20%)

Query: 217 HAGHSHDYDLEFHEHGHGHGHDHAELEGLELSLEGYQDAHERAHANDIRKRFSNRNVTTG 276
           H GH HD+D   H+H HGHG    E  G              AHA D     + R    G
Sbjct: 178 HHGHDHDHD---HDHDHGHGDGACETCG-------------HAHAPDASAVLAAR----G 217

Query: 277 QIILFGLTGGLI--PCPAAITVLLLCLQVKEVALGAVLVLCFSIGLAITLVTVGAAAAIG 334
              +  L G +   PC  A+ VL+L L+++  A     V+  ++G A   V V A AA G
Sbjct: 218 PREILALIGAVAIRPCTGALFVLILGLRLQIEAAAVAGVVAMALGTASVTVAV-AVAATG 276

Query: 335 ARQ----ASNRWPWLGAVARRAPYLSSLLIIGVGIYVGVHGW 372
            R+    AS  W        +A +L S+L IG G+ V +  W
Sbjct: 277 LRESSALASGGW-------SQARHLGSVLEIGAGVLVALLAW 311



 Score = 58.2 bits (139), Expect = 3e-13
 Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 7/126 (5%)

Query: 26  GALHGLEPGHSKTMMAAFIVAIRGTVKQAVLLGLASTLSHTAVVWLVAMAGMYLGQNLNA 85
           G  H   PGH K ++  + VA R ++ +   + L ++L   A   ++   G ++ Q   A
Sbjct: 69  GFFHAAGPGHGKVVIGGYGVARRISMLRLSGVALIASLGQAATAIVLVGVGAWVFQASTA 128

Query: 86  ETT---EPYFQLASAAIIITIALWMLWR-TWRGEQMWRFEEGDDLQHDYHH---HDEMQR 138
           + T   + +F  ASAA I+ + LW++WR   R     R E      HD+HH   HD    
Sbjct: 129 QLTGVADDWFAPASAAAILVLGLWLVWRGVARLRAARRVEAHHHDHHDHHHGHDHDHDHD 188

Query: 139 IDTGHG 144
            D GHG
Sbjct: 189 HDHGHG 194