Pairwise Alignments

Query, 1004 a.a., putative transposase from Pseudomonas putida KT2440

Subject, 1000 a.a., transposase, TnpA family from Dechlorosoma suillum PS

 Score =  574 bits (1480), Expect = e-168
 Identities = 340/994 (34%), Positives = 543/994 (54%), Gaps = 30/994 (3%)

Query: 4   MASVERTAYPILPSQLPAKELHRSYSLSDSEIEWVNNTAKSPALSIGLAIQLKVFQQLHY 63
           M  +  TAYP L +   A++L   Y+L+  EI +++ T K P       I LK+FQ+L Y
Sbjct: 1   MTQLHETAYPRLKADPSAQDLDEIYTLTPDEIRFIDKTVKRPIARSAAFIYLKLFQRLGY 60

Query: 64  FVPFEELPQELISH-VRQCLRYGARIAPRYSNPRTLYRHQ--AAVRQYLQVTPFYSSDGL 120
           FV   ++P  +  H V Q     AR        RT  R    AA+R+YL V P     G 
Sbjct: 61  FVHIRDVPAAIRQHIVVQTGHRPARADELRQFDRTTARTTLIAALRRYLNVRPL-DDQGR 119

Query: 121 AVTEQIARDCAVVLEQRVDLINAMLDELIQRGYELPAYSTLNNLAETALASAQEVTFNLV 180
           A    +A   A       D+IN ML+EL+   YELP +STL+ LA  A     +V F  +
Sbjct: 120 AWLRHVAETAADSRHVVADIINVMLEELVHHRYELPGFSTLDRLAVQAREKIHDVHFASL 179

Query: 181 VTRAPIEVIYKLKELLDTDFGRRQSDFNALKQAPKKPSRKHLEVLIDHLAWLESFGDLEA 240
             +   +V   +  L     G   S +N LK+ PKKP+ K     + H+  L+   D   
Sbjct: 180 ADQLDAKVKALIDNLFKVKSGETSSTWNLLKREPKKPTNKETRFYLQHIRRLQLLVDQLP 239

Query: 241 IFEGIVDAKIRHFAAQAAAADVSELKDCSLPKRHTLMLALIYRMRVRTRDHLAEMFIRRI 300
           I + I   K++ +   A + D +E+ +    KR+ L +  I     +T D  A++F+R +
Sbjct: 240 IPD-IPVPKLKQYRYIARSLDATEMAELKPQKRYALAVIYIRSQFAQTLDDAADLFVRML 298

Query: 301 STIHKRAKEELEQIQARQRQKLEQLAATLDGVVQILVQEPDDQE-----AGSLIREYLSP 355
             +  +A+ +L + Q    Q+ ++L   L  ++     +  D +      GSLI E    
Sbjct: 299 QNLDNQARNKLGEYQQEHLQRTDRLIGQLKEMLLAYRIDGTDHQRVEAIGGSLIAE---- 354

Query: 356 DGNLDRLRETCAEVQATGGNNYLPLIWKHFRSHRSLLFRLSHLLQLEPTTQDRSLTQALQ 415
              +D L   C E  A  G N+LP + + ++  R+ L     ++  + +++D +L + ++
Sbjct: 355 ---VDDLVAICDEHMAYAGRNHLPFLIQPYKMVRAQLLNCIEIVNPQSSSEDDTLIRMMK 411

Query: 416 LIQDSENLHREWI-------DEHVDLSFASERWVKVVRRPSSEGPPT--NRRYLEVCVFS 466
            +Q       E +       +   D  +    W K+V    ++G     NRRY E+ V  
Sbjct: 412 ALQALRGTRHEVVPLSLVGLNVEEDFQWLPSTWRKLVISERADGQVVAINRRYFELAVLY 471

Query: 467 YLASELRSGDMCVQGSVSFADYRKQLLPWEECLQRLPAYCEKMGLPGTAKEFVASLKTQL 526
            +  EL+SGD+ +Q    + DYR+QL+  +   + L  Y E  G+   ++ F  SLK  L
Sbjct: 472 AIRDELKSGDLFIQHGERYDDYREQLVDDDTLNRELAQYGEVTGVETDSRAFTESLKAAL 531

Query: 527 EETAQQLDEKFPSCRGDVSINEAGEPVLRRVAARDIPPSAISLQTALMQRMPARHVLDIM 586
            ETA+++D +FP       ++  G  +L++  A + PP   ++   + + M    ++D++
Sbjct: 532 LETAEEVDAEFPENAYAEIVD--GRLILKKPPASEPPPGIRAIDQLITEHMENISIVDVL 589

Query: 587 ANIEHWIQFTRHFGPMSGNEPKLKEPAERYLMTIFAMGCNLGPSQAARHLTGNVTPHMLS 646
            + E W+Q  + F P+ G E +++E   R + T+F  GCNLGP+Q AR + G ++   ++
Sbjct: 590 IDTERWLQLHKLFRPLMGTESRIEELRPRVISTLFCYGCNLGPTQTARSIRG-MSRKQIA 648

Query: 647 YTNRRHLSLEKLDKANRELVELYLQLDLPKLWGDGKAVAADGTQFDFYDDNLLAGYHFRY 706
           + N ++++ E L+KA  +++  Y + +LP  WG GK  +ADGT+++ Y+ NL++ +H RY
Sbjct: 649 WLNIKYVTEEVLEKAIVKVINAYNKFELPGYWGSGKHASADGTKWNLYEQNLISEHHIRY 708

Query: 707 RKMGAVAYRHVANNYIAVFQHFIPPGIWEAIYVIEGLLKADLSVEADTVYSDTQGQSATV 766
              G + Y HV++ +IA+F HFI  G +E  ++++GL+     +  DT++ DTQ QS TV
Sbjct: 709 GGYGGIGYYHVSDKFIALFSHFISCGTYEGTHILDGLMTNTSDIRPDTIHGDTQAQSYTV 768

Query: 767 FAFTHLLGINLMPRIRNWRDLVMCRPDRGASYKHINRLFTDTADWNLIETHWQDLMQVAL 826
           FA +HLLGI LMPRIR  +DLV  RPD    + HI+RLF+D  +W +IETH  D+++VA+
Sbjct: 769 FALSHLLGIKLMPRIRGIKDLVFHRPDNNKKFTHIDRLFSDDINWQMIETHLPDMLRVAV 828

Query: 827 SIQAGKISSPMLLRKLGSYSRRNKLYHAAQALGSVIRTIFLLNWIGSRELRQEVTANTNK 886
           SI+ GKIS+  +LR+LG+YSR+NKLY A + LG VIRT+FLL ++G+ ELR+ + A TNK
Sbjct: 829 SIKLGKISASAILRRLGTYSRKNKLYFAFKELGKVIRTMFLLKYVGNVELRRLIHAETNK 888

Query: 887 IESYNGFSKWLSFGGD-VIAENDPDEQQKRLRYNDMVASSVILQNTVDMMRILHKLAREG 945
            E +NGF K L FGG+ VIAEN   EQ+K ++YN +VA+ VIL N V M R+L +L  EG
Sbjct: 889 SEQFNGFEKKLFFGGEGVIAENLRHEQRKIIKYNHLVANLVILHNVVGMSRVLKQLQAEG 948

Query: 946 WQFTDEDVSFLSPYLTSNVKRFGEFNLKLNRPPE 979
                E ++ L+PY   ++ RFG++ L   R  E
Sbjct: 949 AVINQEVLAGLAPYRLEHINRFGDYVLDFRRKAE 982