Pairwise Alignments

Query, 604 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 662 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 73.6 bits (179), Expect = 3e-17
 Identities = 71/279 (25%), Positives = 123/279 (44%), Gaps = 45/279 (16%)

Query: 320 RNAQSELFNAARQAGMAEIATNVLHNVGNVLNSVNTSSDLIARTLRSSKTQGLGKAMQLF 379
           R  Q +L   AR   M E+A+ + H +   L+++            +S T G      L 
Sbjct: 425 RQQQEKLEQTARLVTMGEMASTLAHELNQPLSAI------------ASYTTGC-----LN 467

Query: 380 REHATDIGRFLDEDPRGRLLPGYLNQLTEAIADEQKEMAIELERMNKSIDHIKEVVATQQ 439
           R  A D  R                   E I+    ++A++ +R  + I  + + V  ++
Sbjct: 468 RLEAGDYTR-------------------EEISGALNKLALQAQRAGRIIRRVHDFVRRRE 508

Query: 440 SYAGAKNVPEPLSVNDLVEDALRMNAGALTRHQVRVVRDF-ADLPLVMGDRHRLLLILIN 498
                 ++ E      ++ED++        + QV ++R   A LP ++ D   L  +LIN
Sbjct: 509 PQRVICHLEE------VIEDSIAFIEPLARKQQVHMLRLVPAHLPKLLADPVLLGQVLIN 562

Query: 499 LISNAKYAMSGPGSDPRTMILRTRIVEGGLLEMSVLDEGEGIAPENLQKIFAHGFTTRKD 558
           L+ N   AM+    + R +I+  +++ G  +E+ + D G GI PE  +K+F+  FTT+ +
Sbjct: 563 LMRNGIDAMAATPPERRQLIVEAQLL-GDQVEVCIADRGCGIPPEVAEKLFSPFFTTKTE 621

Query: 559 GHGFGLHSCALAAIEMNGHLTAHSDGPGLGAVFTLRIPL 597
           G G GL+ C  + IE +G       G   G VF   +PL
Sbjct: 622 GMGMGLNICR-SVIEFHGGRLWFEPGAEGGTVFIFTLPL 659