Pairwise Alignments

Query, 604 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 1013 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 70.1 bits (170), Expect = 4e-16
 Identities = 83/324 (25%), Positives = 146/324 (45%), Gaps = 30/324 (9%)

Query: 289  RSFAEVRRVNNALQSANDVLEQRVEERTL--ALRNAQSELFNAARQAGMAEIATNVLHNV 346
            R  A VR ++   ++  ++ +   E + L   L  AQS+L  + + A + ++A  V H +
Sbjct: 700  RVLAVVRDIDGRKRAEQELQQALAEAKALNQRLAEAQSQLLQSEKMASIGQLAAGVAHEM 759

Query: 347  GNVLNSVNTSSDLIARTLRSSKTQGLGKAMQLFREHATDIGRFLD----EDPRGRLLPGY 402
             N +  V ++   +   LR            +    A D G   D    E  R   L   
Sbjct: 760  NNPIGFVYSNLGTLDHYLREIFAI-------IAAYEAADSGPCRDCRQLESARQLKLEKD 812

Query: 403  LNQLTEAIADEQKEMAIELERMNKSIDHIKEVVATQQSYAGAKNVPEPL-SVNDLVEDAL 461
             + L   I     E    LER+ K    +K+     ++ +   ++ + L S  ++V + L
Sbjct: 813  FDFLRSDIVQLLAESRDGLERVAKIARDLKDFSRAGEAESQWADLHQGLDSTLNIVWNEL 872

Query: 462  RMNAGALTRHQVRVVRDFADLPLVMGDRHRLLLILINLISNAKYAMSGPGSDPRTMILRT 521
            +        ++  V +++ +LPLV  +  ++  + +NL+ NA  A+   G     + LRT
Sbjct: 873  K--------YKCTVHKEYGELPLVWCEPSQINQVFMNLLVNAAQAIPKKGD----IWLRT 920

Query: 522  RIVEGGLLEMSVLDEGEGIAPENLQKIFAHGFTTRKDGHGFGLH-SCALAAIEMN-GHLT 579
                G  + ++V D G GIAPE L ++F   FTT+  G G GL  S A + ++ + G L 
Sbjct: 921  GR-RGDEVFVAVSDSGCGIAPEYLHRLFEPFFTTKPVGKGTGLGLSLAYSIVQKHQGRLE 979

Query: 580  AHSDGPGLGAVFTLRIPLIAVTEP 603
              S+ PG G+ FT+ +P+ A   P
Sbjct: 980  VESE-PGRGSTFTVWLPIEARPRP 1002