Pairwise Alignments

Query, 583 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

Subject, 618 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  304 bits (778), Expect = 8e-87
 Identities = 196/592 (33%), Positives = 294/592 (49%), Gaps = 44/592 (7%)

Query: 29  LLVKVKPANKALKANVEGYIGTLGDRDEEALLRFSRGAEEQARKAAQALGYYQAQIDTEV 88
           L + V   ++ALK N+  ++G + D + +    F    E+    A Q++GYY  +++  +
Sbjct: 34  LTLSVNGVDEALKRNILAHLGAMPDSEVQRRA-FLFNVEDNVTTALQSMGYYHGEVEDHL 92

Query: 89  KPASDADHPPKLIISINPGEPIRLRNVTVRIEGPASEMKAF-RVPDSKALRPGEQLNHGH 147
                   P +L +++  GEP++++ V +   G   + +AF +      ++PG+ LNHG 
Sbjct: 93  VEKDKG--PWELTLTVKAGEPVKIQWVDINFSGEMLDDRAFDKWLADVNIKPGDTLNHGM 150

Query: 148 YEDAKRLIQNQASRYGFFSGRFSSQRLAVDPQAGVADIELVYQSGPRYRLGAVTFGGDTP 207
           Y D K  +   A   G+F G F+  ++ ++     A I L + SG RY  G V+F G T 
Sbjct: 151 YSDVKSQLVTLALARGYFDGEFTESQIKINRDLNTAQISLHFNSGARYHFGQVSFEGHT- 209

Query: 208 LDEDLLQRMVSFKPGTPYDSELVAELNNDLQSSGYFEGVRVDAAPTAAVGEEVPVDVHLE 267
           L+ D+L +++ FK    Y +  V+ LN  L  +GYF  ++V      A   ++PV V L 
Sbjct: 210 LEPDILTKLIPFKEDASYSTRRVSALNRQLLDTGYFSNIKVIPQLDLAKDNQLPVKVELT 269

Query: 268 TRKPRTMGLGLGFSTDVG--------PRGKANWTRHWVNPQGHSYGWETELSAPRQNVGL 319
            +   ++ LGLG   D+G        PR +  W    +N  GHS     E S  R     
Sbjct: 270 NKASHSIELGLG--GDIGQSSDKTFDPRVRVTWRTPQINKYGHSQETSLEWSPDRPKFLT 327

Query: 320 WYDIPLDPPLTDKLRFAGGYQ-------------NEELAGTDTL-SKLLTVGPEWHSKLP 365
            Y IPL  PL D+L+   G Q             N +   T  L S    +G     +L 
Sbjct: 328 TYTIPLTHPLDDQLKIRLGLQRDKYGVTQIYEPENRDFRNTGQLESTKYLLGLLRQQRLD 387

Query: 366 SGWQRVISLKYQREEYRLGDDSGLSNLLMPGVSFS-FLRSDNRIDPHNGYRLQFDVQGAK 424
           + W    SL   REEY   D     +  + G++FS   R DN +DP +GYR  + +  A 
Sbjct: 388 NQWLMSYSLDAIREEYTQSDVDYNPSFYLAGINFSKTTRGDNSLDPKSGYRQTYSLDYAD 447

Query: 425 EGLVSDTNLLHGNVLLKGLTTLGHNHRFLGRVQFGGSATNGFK-NNIPPSLRFFAGGDQS 483
             L S+T L       K + T   NHR + R+    +  N  +   IPPSLR+FAGGDQ+
Sbjct: 448 PYLGSETRLARLQAKFKWIDTFFDNHRIVARMDLAANLANEDELALIPPSLRYFAGGDQT 507

Query: 484 VRGYDYQTLSP--------KNSDGDRIGGRYLVAGSVEYQYSLTEKWRVATFVDQGNSFN 535
           +RGY YQ L P         N + + IGGRYL+ GSVEYQY +T  WRVATFVD GN+F+
Sbjct: 508 IRGYGYQELGPYLDYIDADGNVNREVIGGRYLMVGSVEYQYYVTPTWRVATFVDAGNAFD 567

Query: 536 DLELPSLKTGVGFGVRWVSPVGPLRLDLAKALDDEGGI----RLHFSMGPEL 583
           + +   +   VG G+ W+SP+GP++LDL   L +   I    R+H +MG EL
Sbjct: 568 NNQFEPV-VSVGGGIHWISPIGPIKLDLGVGLKETDTIDRSWRIHLTMGTEL 618