Pairwise Alignments

Query, 583 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

Subject, 826 a.a., bacterial surface antigen (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 53.5 bits (127), Expect = 3e-11
 Identities = 109/554 (19%), Positives = 200/554 (36%), Gaps = 99/554 (17%)

Query: 100 LIISINPGEPIRLR--NVTVRIEGPASEMKAFRVPDSKALRPGEQLNHGHYEDAKRLIQN 157
           + I++N GE  +++  N+T  + G    MK+        ++ G+  N G    A+ +   
Sbjct: 261 ITINVNEGEKYKVKDVNLTGDLMGREELMKSIL-----PIKAGDMYNGGDVTFAEEMYSK 315

Query: 158 QASRYGFFSGRFSSQRLAVDPQAGVADIELVYQSGPRYRLGAVTFGGDTPLDEDLLQRMV 217
              R+G+      +    +D +     + +  + G R  + ++ F G+T  ++++++R +
Sbjct: 316 YLGRFGYAYPEVKTYP-EIDDKTKEVTLNINIKPGKRVYVRSINFTGNTVTEDEVMRREL 374

Query: 218 SFKPGTPYDSELVAELNNDLQSSGYFEGVRVDAAPTAAVGEEVPVDVHLETRKPRTMGLG 277
               G   +S  V +    L   G+FE V  +        + V V V ++ +   +   G
Sbjct: 375 RQMEGAWLNSAQVEQSKARLNRLGFFETVDTETIQVPGTDDLVDVAVKVKEQPSGSFNAG 434

Query: 278 LGFSTDVGPRGKANWTRHWVNPQGHSYGWETELSAPRQNVGLWYDIPLDPPLTDKLRFAG 337
           +G+ T+ G   +    ++     G+  G     +   +NV L Y    DP  T      G
Sbjct: 435 VGYGTESGLSLQFGVQQNNFLGTGNQAGVSLSTNKYSKNVNLSY---TDPYWTKDGVSLG 491

Query: 338 G--YQNEELAGTDTLS--KLLTVGPEWHSKLPSGWQRVISLKYQREEYRLGDDSGLSNLL 393
           G  Y NE  A    L   K  + G   +S  P      I+         + + S     L
Sbjct: 492 GSVYWNEFDANEANLERYKNSSYGVALNSGFPINEYNRINGGIGYRHNTISEISAYEQAL 551

Query: 394 M---------PGVSFSFLRSDNRIDPHNG--YRLQFDVQGAKEGLVSDTNLLHGNVLLKG 442
                     P    SF   +  +  +     R  F   G+ + L S    +  + L   
Sbjct: 552 RFYNIYRDDDPNADLSFDNFELSLGWYRSTLNRGTFPTDGSSQRL-SGKMTVPASDLQYF 610

Query: 443 LTTLGHNHRF----------LGRVQFG-GSATNGFKNN---IPPSLRFFAGGDQSVRGYD 488
            T    N+ F          L R + G G+    + +N   +P    +++GG  S+RG+ 
Sbjct: 611 KTDFDTNYYFPINRSQSFVLLARGRLGYGNGYGQYNDNDQILPFWENYYSGGSSSLRGFK 670

Query: 489 YQTLSPKN------------------------------SDGDRIGGRYLVAGSVE----- 513
             ++ P++                              S G  IGG  +   S+E     
Sbjct: 671 SNSVGPRSFYLFRGSEPCSPDPSGDGCSLPGDPNKIQVSSGRSIGGNAIATASLELIVPT 730

Query: 514 --YQYSLTEKWRVATFVDQGN-----------------SFNDLELPS----LKTGVGFGV 550
                + T   R + FVD GN                  F+ L+  S    ++   G  +
Sbjct: 731 PFLDEAYTNSVRTSFFVDAGNVWDTEFDYAKYQTLPAEEFDKLQDYSDPARIRASWGVSL 790

Query: 551 RWVSPVGPLRLDLA 564
           +W+SP+GP+   LA
Sbjct: 791 QWLSPMGPMVFSLA 804



 Score = 27.3 bits (59), Expect = 0.003
 Identities = 15/64 (23%), Positives = 30/64 (46%)

Query: 163 GFFSGRFSSQRLAVDPQAGVADIELVYQSGPRYRLGAVTFGGDTPLDEDLLQRMVSFKPG 222
           G+     +S ++A+ P      I +    G +Y++  V   GD    E+L++ ++  K G
Sbjct: 239 GYIRFEVTSTQVAMTPDRKGLYITINVNEGEKYKVKDVNLTGDLMGREELMKSILPIKAG 298

Query: 223 TPYD 226
             Y+
Sbjct: 299 DMYN 302