Pairwise Alignments

Query, 270 a.a., exodeoxyribonuclease III / apurinic/apyrimidinic endodeoxyribonuclease VI from Pseudomonas putida KT2440

Subject, 263 a.a., exodeoxyribonuclease III protein from Sinorhizobium meliloti 1021

 Score =  154 bits (389), Expect = 2e-42
 Identities = 93/270 (34%), Positives = 143/270 (52%), Gaps = 11/270 (4%)

Query: 1   MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDDQFPLADVQALGYHVHYHGQK 60
           MKI  +NING++AR   L   + +  PD+  LQE K  D+ FP  +++ALGYHV  HGQK
Sbjct: 1   MKIATWNINGVKARLDGLVGWLRESNPDIACLQEIKSVDETFPRGEIEALGYHVETHGQK 60

Query: 61  GHYGVALLSRQPPLSLHKGFATDEEDAQRRFIWGTFADANGSPITIMNGYFPQGESRDHP 120
           G  GVALLS+  P  +++G   D  D Q RFI G F+  NG  + +   Y P G   +  
Sbjct: 61  GFNGVALLSKVRPDEINRGLPGDPADEQSRFIEGVFS-VNGGALRVCCLYLPNGNPVE-T 118

Query: 121 TKFPAKQRFYSDLQALLESQFRNDQPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSF 180
            K+P K  +   L A  E +   ++P+++ GD N+ P+  D      + K W       +
Sbjct: 119 EKYPYKLAWMRRLAAFAEQRLVLEEPLILAGDYNVIPEAHDCW----DVKVW--RNDALY 172

Query: 181 LPEEREWMERLKGWGLVDSFRHLYPDVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQQL 240
           LPE R    RL+  G  D+ R    D    +S++DY++  +  +   G+RID +M S + 
Sbjct: 173 LPETRAAFRRLRNLGFTDAVR-ATSDEAPLYSFWDYQAGCW--QKNFGIRIDHLMLSPEA 229

Query: 241 VPRIKAAGVDYELRGMEKPSDHAPIWLELS 270
             ++ +  ++  +R  EKPSDH P+  E +
Sbjct: 230 ADKLVSTSIEKHVRAWEKPSDHVPVTAEFA 259