Pairwise Alignments

Query, 250 a.a., putative Transmembrane regulator PrtR from Pseudomonas putida KT2440

Subject, 275 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 54/261 (20%), Positives = 106/261 (40%), Gaps = 29/261 (11%)

Query: 2   TRLIPSDDELHAFVDERLEPVRRAEVQAWLAANPQAAARVEGWRADAR------------ 49
           T+ +  +  L A++D  L    ++E+ A LA + +A A +E  ++ +             
Sbjct: 4   TKGLALEVRLSAYIDGELAESEKSELDALLARDDEARALLEKLKSGSAFGNGAFENFLHD 63

Query: 50  -----RLRTALAGLGELPGAAQLDLGQLRRQLRQRRQRRWAAAAVVMLALGVGGLGGWQV 104
                 +R    G G  P + ++    L R+  +   R  AA+  + L   +GG  G+ +
Sbjct: 64  PVPLALVRQIKQGPGINPKSERVTTASLPRRSARIWPRILAASTALFL---LGGAAGFIL 120

Query: 105 RDATLARVDLPMAD-------AVQAHRLFAGSEA--LDIQASDPGQLRDWLGRHFSRVGQ 155
             AT     +  AD        V +HR+F+  +   +++  +   ++  WL         
Sbjct: 121 GSATDFAEPMNQADDRPWIDDIVGSHRIFSRQKEHLVEVPGTQAAEIETWLAASVGVSFT 180

Query: 156 LPDLAGYGFKPVGARLLSNEQGPAALLVFEDGKGQRISLFLRSPGNLYRRMPDGQRVDGQ 215
           +P+L   G    GARLL+    P A LV+ D + +  ++     G+  +     + + G 
Sbjct: 181 VPNLDRKGLSFEGARLLAANGRPVAQLVYRDREAEVFTICFLKQGDGQQSDEFSETIRGD 240

Query: 216 LEARYWSHGAYNFALVSAADD 236
           L    W     +F ++  + D
Sbjct: 241 LGLVSWEREGVSFVMIGPSSD 261