Pairwise Alignments

Query, 173 a.a., putative ECF sigma factor PrtI from Pseudomonas putida KT2440

Subject, 184 a.a., RNA polymerase sigma factor protein from Sinorhizobium meliloti 1021

 Score = 97.4 bits (241), Expect = 1e-25
 Identities = 68/171 (39%), Positives = 93/171 (54%), Gaps = 6/171 (3%)

Query: 3   DLDDHQWRELLARLRRFAVWLTREPGSADDLVQATVERALSRRDQQRDADALRAWLFTIL 62
           D  + +  EL+  LRR++  L       +DL+Q  VE+ L+RR+Q R  + LRAW FTI+
Sbjct: 20  DAFEEEVLELMPALRRYSRSLAHSDPDGEDLLQDCVEKVLARREQWRGVN-LRAWAFTIM 78

Query: 63  YRQFLDGKRRERLHARWLSWFGRNEHDDEPVGDNLETIVLAQADLQAFARLTAEQRALLL 122
              F +G RR   H             +E   D LE     Q  ++   RL+A+ RA+L+
Sbjct: 79  TNLFRNGHRRRAQHPEVEFDEALGLRAEEDNADPLER----QRLMRGLERLSADNRAVLM 134

Query: 123 LVSIEGLSYKEAAQALGIPIGTVMSRLSRARNALRELTEGNPQPPALRRLK 173
           LV IEG  Y++ A  + IPIGTVMSRLSRAR  L E  + +    ALRR K
Sbjct: 135 LVVIEGYRYQDVADMMEIPIGTVMSRLSRARRQLAEAMK-DDNVIALRRPK 184