Pairwise Alignments

Query, 347 a.a., putative spermidine/putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 357 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  116 bits (291), Expect = 8e-31
 Identities = 92/341 (26%), Positives = 152/341 (44%), Gaps = 15/341 (4%)

Query: 13  ALLALGLSNAQAAQQMVVVGYGGAGQKAQDEAIFKPFVAQDGSQLIQ-SEYNGEM-ARIQ 70
           +LL + L  A  A+++++   GGA  KA  EA F PF    G +++  +  N EM A+  
Sbjct: 21  SLLPISLP-ALGAEKVIIASTGGAYDKALREAWFDPFTKATGIEVVTVAATNSEMRAKAA 79

Query: 71  VMADTGNVDWDVVQIEGPDLMRGCDEGIYERLD--WQRLGHAAELIPAAAQDCGSAALVW 128
            M  TGNV+WD+               + E L    ++     +L   A    G+     
Sbjct: 80  AMVKTGNVNWDLYLDGEIQAASKAHRKVTEDLTEFCRQFADREDLSVNACSAGGALLQST 139

Query: 129 SVAIAYDRSKLAQA-PASWADFWDVDKYPGKRGLRK--RAVYNLEFALLADGVKVEDVYR 185
           +  +AY   K   + PA+WAD WD  K+PG+R           +  ALLADGV  ++++ 
Sbjct: 140 ATLLAYRTGKHGDSVPATWADMWDTRKFPGERAFPNFDDPWRVMAAALLADGVTRDELF- 198

Query: 186 VLSTPAGVERAFAKLSELKPHIQ-WWDAGAQPAQWLAAGDVVMTSTYSGRIAVAAQQGSP 244
               P  ++RA AKL ++KP +  WW  G Q  Q    G+  +   +  R      +G P
Sbjct: 199 ----PLDIDRALAKLDQIKPSVSLWWKTGDQSVQGFRNGEYSLGQIWLTRAKAMQSEGLP 254

Query: 245 LAVVWPGSLYGMDYWAIIKGSRHVDQAKRLIAY-ANQPDTQVRYVQQIPYGPTNTQAAAR 303
           +A  +  +    D  A++KG+ H D A +LI +  N P  Q +  + +   P ++ A A 
Sbjct: 255 IAWSYKAAFLVGDRIALLKGAPHRDNALKLITFWLNSPAAQAKACEVLSCTPPSSDAIAM 314

Query: 304 LDPALANWVPTSPQNLQGALAMNVEFWVDHGEELEQRFNAW 344
           +       +P         +  + E+   +   + QR+N W
Sbjct: 315 MSDEARKTMPQGDDVRDYVIIPDAEWINANAAMMLQRWNEW 355