Pairwise Alignments

Query, 347 a.a., putative spermidine/putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 348 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotD from Klebsiella michiganensis M5al

 Score = 79.7 bits (195), Expect = 1e-19
 Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 25/314 (7%)

Query: 10  LCAALLALGLSNAQAAQQMVVVGYGGAGQKAQDEAIFKPFVAQDGSQLIQSEYNGE---M 66
           L A  LA+G+S A A     +  Y     +     + + F  + G ++I S Y       
Sbjct: 9   LAAGALAVGMSAAHADDSKTLYFYNWT--EYVPPGLLEQFTKETGIKVIYSTYESNETMY 66

Query: 67  ARIQVMADTGNVDWDVVQIEGPDLMRGCDEGIYERLDWQRLGHAAELIPAAAQ------D 120
           A+++   D G  D  V      D MR   EG+ +++D  +L +   L P          +
Sbjct: 67  AKLKTYKD-GAYDLVVPSTYFVDKMR--KEGMLQKIDKSKLSNFGNLDPEMLNKPFDPNN 123

Query: 121 CGSAALVW-SVAIAYDRSKL-AQAPASWADFWDVDKYPGKRGLRKRAVYNLEFALLADGV 178
             S   +W + AI  +  ++  +   SWAD W  + Y     L   A    + AL   G 
Sbjct: 124 DYSIPYIWGATAIGINSDEIDPKTVTSWADLWKPE-YKSSLLLTDDAREVFQVALRKLGY 182

Query: 179 KVEDVYRVLSTPAGVERAFAKLSELKPHIQWWDAGAQPAQWLAAGDVVMTSTYSGRIAVA 238
                    + P  +E A+ +L +L P++  +++   PA     G+V +   ++G   VA
Sbjct: 183 SGNT-----TDPKEIEAAYNELKKLMPNVAAFNSD-NPANPYMEGEVNLGMVWNGSAWVA 236

Query: 239 AQQGSPLAVVWP--GSLYGMDYWAIIKGSRHVDQAKRLIAYANQPDTQVRYVQQIPYGPT 296
            Q G+PL VVWP  G ++ MD  +I   +++VD A +LI +  +P+   +  + I Y   
Sbjct: 237 RQAGTPLEVVWPKEGGIFWMDSLSIPANAKNVDGALKLINFLLRPEIAKQVAETIGYPTP 296

Query: 297 NTQAAARLDPALAN 310
           N  A   L P +AN
Sbjct: 297 NLAARKMLSPEVAN 310