Pairwise Alignments

Query, 650 a.a., Oxidoreductase, FMN-binding from Pseudomonas putida KT2440

Subject, 686 a.a., DgcA Dimethylglycine demethylase subunit A (from data) from Pseudomonas fluorescens FW300-N2E3

 Score =  312 bits (799), Expect = 4e-89
 Identities = 209/686 (30%), Positives = 334/686 (48%), Gaps = 52/686 (7%)

Query: 4   AFPLLFEPLQIRGKRLKNRIMSTGHDTCLPTDN-LVNDKLIAYQRDRAAGGVGLIVLQVA 62
           AF  +F+P+QI    ++NR++ST H     TD  +  D+ + Y  ++A GG+GL +   +
Sbjct: 2   AFEAMFQPIQIGKLTIRNRVLSTAHAEVYATDGGMTTDRYVKYYEEKAKGGIGLAICGGS 61

Query: 63  G--VHDSARYTSHVLMATDDACIDGYRQLAEACHAHGTVVLSQLFHPGREIMESADGLLA 120
                DS +     +   DD  I  ++ LA+A H HG  ++ Q+ H GR      +    
Sbjct: 62  SSVAIDSPQGWWKSVNLADDRIIPHFQNLADAMHKHGAKIMIQITHMGRRSRWDGEHWPT 121

Query: 121 VAYSASAVPNERFRVMPRALDQAMIDEIVQGYASAARRLHQAGLDGVEVVASHGYLPAQF 180
           +  S S +     R   + ++   I  ++  YASAA R    GLDGVE+ A H ++  QF
Sbjct: 122 LL-SPSGIREPVHRATCKTIEPEEIWRVIGNYASAAARAKAGGLDGVELSAVHQHMIDQF 180

Query: 181 LNPRVNVRSDGYNGDLDQRLRFLREVLAAVRAATDEQFIIGLRISADERDSQGLSEDE-- 238
            +PRVN R+D + G  + R+RF  EV+ AVR      F +G+RI  DE    GLS ++  
Sbjct: 181 WSPRVNKRTDEWGGSFENRMRFGLEVIKAVRKEVGPDFCVGIRICGDEFHPDGLSHEDMK 240

Query: 239 SLAAAMALQGQLDYLHIVAGTSASLGGAVHIVPPMAIEPAYLAREAGTFKQQLAIPLFVT 298
            +A      G +D++ +V     +     +++P M+  P      A   K+ +  P+   
Sbjct: 241 QIAKYYDDTGMIDFIGVVGSGCDTHNTLANVIPNMSYPPEPFLHLAAGIKEVVKAPVLHA 300

Query: 299 GRINQPQEAELILARGQADVCGMTRALICDPSMPAKTERGQVEDVRACIACNQACIGHFH 358
             I  P +A  IL  G  D+ GMTRA I DP + AK + GQ++ ++ C+  N  CI   +
Sbjct: 301 QNIKDPNQATRILEGGYVDMVGMTRAHIADPHLIAKIKMGQIDQIKQCVGANY-CIDRQY 359

Query: 359 RGLPISCIQRPETGRE-LQYGHLTPTSS--PKRIMIAGGGPAGMKAAAVAAARGHQVTLY 415
           +GL + CIQ   T RE +   H+   S+   +++++ G GPAGM+AA VAA RGH VTL+
Sbjct: 360 QGLDVLCIQNAATSREYMGVPHIIEKSTGVKRKVVVVGAGPAGMEAARVAAERGHDVTLF 419

Query: 416 EAGPQLGGQVLLAQLLPRRSEFGGASTNLQREMALAGVEVVRNTRVDRALVERERPDLVI 475
           E    +GGQ+  A   P+R +  G +   Q E+A   V++      D A +   RPD+V+
Sbjct: 420 EKKEFIGGQITTASKAPQRDQIAGITRWFQLELARLKVDLRLGVAADAATILDLRPDIVV 479

Query: 476 AATGATPYWPAFERTGELQ--VVDAWQLLRNEVKPGRSVLVIDWRCDWIGPGIAERLVRE 533
            A G  P+    E  G  +  VV +W +L  +V PG++VLV D  C++ G  +A+ L  +
Sbjct: 480 LAVGGHPFLEQNEHWGAAEGLVVSSWDVLDGKVLPGKNVLVYDTICEFTGMSVADYLADK 539

Query: 534 GHQVQLAVNGTH-----CGESLPLYVRDQLAGELHRLGIPVTPYARLYGSDDNTVYL--- 585
           G QV++  +         G S P Y R     E+   G  +    ++Y   D  V +   
Sbjct: 540 GSQVEIVTDDIKPGVAIGGTSFPTYYRSMYPKEVIMTGDMMLD--KVYREGDKLVAVLEN 597

Query: 586 QHTASGDPMIFEGIDTLVLCMGHQPQDRLATEL------AGVVDVR-------------- 625
           ++T + +  +   +D +V+  G +P + +   L       G +D+               
Sbjct: 598 EYTGAKEERV---VDQVVVENGVRPDEEIYYALKEGSRNKGQMDIEALFAIKPQPSLSQA 654

Query: 626 -------RIGDCLAPRTAEEAIHDGL 644
                  RIGDC+A R    AI+D L
Sbjct: 655 GDGYLLFRIGDCVAQRNTHAAIYDAL 680