Pairwise Alignments

Query, 650 a.a., Oxidoreductase, FMN-binding from Pseudomonas putida KT2440

Subject, 672 a.a., 2,4-dienoyl-CoA reductase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  257 bits (656), Expect = 1e-72
 Identities = 204/692 (29%), Positives = 307/692 (44%), Gaps = 66/692 (9%)

Query: 4   AFPLLFEPLQIRGKRLKNRIMSTGHDTCLPTDNLVNDKLIAYQRDRAAGGVGLIVLQVAG 63
           +FP L EPL +   +LKNR++     T L  +    +KL A+ ++RA GGVGLIV     
Sbjct: 2   SFPHLLEPLDLGFTQLKNRVLMGSMHTGLEEEKGGFEKLAAFYKERALGGVGLIVTGGIS 61

Query: 64  VHDSARYTSHVLMATDDACIDGYRQLAEACHAHGTVVLSQLFHPGREIMESADGLLAVAY 123
            +   R T H    +    +  +R + +A H  G  +  Q+ H GR       G    + 
Sbjct: 62  PNLRGRLTPHACQLSFPWQVGKHRIVTQAVHEAGGKICMQILHAGRY------GYHPFSQ 115

Query: 124 SASAVPNERFRVMPRALDQAMIDEIVQGYASAARRLHQAGLDGVEVVASHGYLPAQFLNP 183
           + S + +      P A+    +   ++ YAS+A    +AG DGVEV+ S GYL  QF++ 
Sbjct: 116 APSKIKSPITPFTPSAMSSRQVRGTIKDYASSAALAKRAGYDGVEVMGSEGYLINQFISS 175

Query: 184 RVNVRSDGYNGDLDQRLRFLREVLAAVRAATDEQFIIGLRISADERDSQGLSEDESLAAA 243
           R N R+D + G  ++R +F  E++ A+RA   + FII  R+S  +    G + DE +  A
Sbjct: 176 RTNTRTDEWGGSFEKRAQFPIEIVNAIRAKVGKDFIIIFRLSMLDLVDNGSTWDEVVQLA 235

Query: 244 MALQGQLDYLHIVAGTS---ASLGGAVHIVPPMA--IEPAYLAREAGTFKQQLAIPLFVT 298
             L+         AG S     +G     VP +A  +     A      KQ +A+PL  T
Sbjct: 236 KWLEH--------AGVSIINTGIGWHEARVPTIATSVPRGAFAWVTQKLKQSVAVPLIAT 287

Query: 299 GRINQPQEAELILARGQADVCGMTRALICDPSMPAKTERGQVEDVRACIACNQACIGHFH 358
            RIN P+  E I+A GQAD+  M R  + DP    K      E +  CI CNQAC+ H  
Sbjct: 288 NRINTPEIGEQIIASGQADMVSMARPFLADPEFVNKAAANTPELINTCIGCNQACLDHTF 347

Query: 359 RGLPISCIQRPETGRELQYGHLTPTSSPKRIMIAGGGPAGMKAAAVAAARGHQVTLYEAG 418
                +C+  P    E +   L PTS  KRI + G GPAGM  +  AA RGH+V L+EA 
Sbjct: 348 SLKRATCLVNPRACYETEINFL-PTSKKKRIAVMGAGPAGMAFSVYAAMRGHEVVLFEAK 406

Query: 419 PQLGGQVLLAQLLPRRSEFGGASTNLQREMALAGVEVVRNTRVDRALVERERPDLVIAAT 478
            ++GGQ  LA+ +P + EF         ++ L  +++  NTR+D  ++E E+ D ++ A+
Sbjct: 407 SEVGGQFNLARKIPGKEEFNETIRYFLNQIKLHKIDLRLNTRLDAKVLETEKFDEIVIAS 466

Query: 479 GATPYWPAFERTGELQVVDAWQLLRNEVKPGRSVLVI----------------------- 515
           G  P   +       +VVD  Q+L  +   G  V +I                       
Sbjct: 467 GVVPRELSLPGFDSPKVVDYQQVLTGQALVGGKVALIGAGGIGFDMAHYLCESESSTLNP 526

Query: 516 -DWRCDWIGPGIAERLVREGHQVQLAVNGTHCGESLPLYVRDQLAGE--------LHRLG 566
             W   W   GI ++    G   Q  V  T   +   L  +    G+        +HRL 
Sbjct: 527 DKWLKQW---GIDKQYQHAGGLTQPEVENTDHRQVYLLQRKTSKMGQGLGKTTGWIHRLV 583

Query: 567 IPVTPYARLYG-----SDDNTVYLQHTASGDPMIFEGIDTLVLCMGHQPQDRLATEL-AG 620
           +         G      DD  +   H   G+ +    +D ++LC G +    L  E+ A 
Sbjct: 584 LKQHDVKMKMGVSYEKFDDAGL---HIRVGEQVEVLAVDNVILCAGQESNRTLVDEMKAS 640

Query: 621 VVDVRRIG--DCLAPRTAEEAIHDGLTVAWAL 650
            + V  IG  D  A   A+ AI  G  +A  L
Sbjct: 641 GIPVHLIGGVDVAAELDAKRAIRQGAELAMRL 672