Pairwise Alignments

Query, 199 a.a., Transcriptional regulator, Cro/CI family from Pseudomonas putida KT2440

Subject, 188 a.a., DNA-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score = 76.3 bits (186), Expect = 3e-19
 Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 5/178 (2%)

Query: 20  LGTRIRGLRKRRGMTLAELAAHSELTAGYISQLERNLSYPSIPALFNIARSLGVTIQWFF 79
           +  R++ LRK+ GMTL  LA  + +T  Y+S++ER LS PSI     +A++L V ++  F
Sbjct: 1   MSIRLKLLRKKLGMTLDVLAEKTGMTKSYLSKVERGLSTPSIATALKLAKALSVKVEELF 60

Query: 80  ASEATTAPEDQGYVVRRNSRLSVHYEDGIVD-QLLTPQPNRQLEMLHSRFPPGTYSQQS- 137
           + E  +   D   +VR   R S+    G  +  +L  Q + +  +    +P   ++    
Sbjct: 61  SEENVSL--DSYSLVRSEDRQSLAASSGSSEYAVLAHQVSERSLLPFILYPAAEFTAHHA 118

Query: 138 -YSHDGEEAGYLLSGTFELWVGERYFQLSEGDSFSFSSQEPHRYGNPGEVDAVVIWVI 194
              H GEE  ++  G  E+        L+ GD+  F++Q+PHR  + G+V A ++ V+
Sbjct: 119 FKEHTGEEFLFVHEGQVEVDFMNERVLLNRGDALHFNAQKPHRLRSVGDVQAQLLVVV 176