Pairwise Alignments

Query, 300 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 291 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  149 bits (375), Expect = 1e-40
 Identities = 87/281 (30%), Positives = 149/281 (53%), Gaps = 6/281 (2%)

Query: 10  FARVVEAGGFAAAGRQLGIPKSRLSRRIAELEERLGTRLLQRTTRQLKLTAVGERYLHHC 69
           F  V EA  F  A ++L +  + +SR+I  LE RLGT+L  RTTR++ LT  G  Y  HC
Sbjct: 10  FVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTIYYRHC 69

Query: 70  QAMLLEAEAADETVASMSSEPRGRLRVSCPVALAHAFLPDVISRFLEQYPLVQLDMVLLN 129
           + +    E A+  +  +   P+G ++++ PVA    F+  +++ F+ QYP V+ ++ L N
Sbjct: 70  RQLQTGLEEAERAITDLKDSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPSVECNVDLTN 129

Query: 130 RRVDLISEGIDVALRVRDLGDEDPALVTRRLRQAQMQLVAAPGFADHIREPGELASLPVL 189
           R +DLI  G D+A+R+  L D   +L+ + L      + A+P + +   EP  L+ L   
Sbjct: 130 RTLDLIEGGYDLAIRLGKLADS--SLMAKPLSSRTHYVAASPSYVEKYGEPHTLSELNQH 187

Query: 190 GAAEADRLVHFRLFGPHGKQQEIALEPRLAIDD-FVVRNAAVRAGLGFTALPSMFCEEEL 248
                +   ++  F  HG+++   +  +L  +  + +R+AA++ G+G   LP  + EE++
Sbjct: 188 NCLIGNH--NYWRFIEHGRERNFKVRGKLICNSGYALRDAALK-GIGIVQLPDYYIEEDI 244

Query: 249 ERGELVRLLPDWSLPGGYLQAVYPHRRGLLPAVRVWIDHLA 289
             G L+  L         + A+YP  R L   VRV +D+LA
Sbjct: 245 HAGRLISFLDTHREAKEGIWALYPQNRHLSAKVRVLVDYLA 285