Pairwise Alignments

Query, 544 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 559 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  298 bits (764), Expect = 3e-85
 Identities = 201/557 (36%), Positives = 303/557 (54%), Gaps = 16/557 (2%)

Query: 3   TLRSMSISRRLWLILVVAVAMLVVLGLLMLRQIHGDLYQAKAE---KTRHVVQTAAGV-L 58
           +L++  +S  +  +L+ AV + +    ++  Q   ++ Q +     + +  +Q    V L
Sbjct: 4   SLKAKVLSLAILPVLLSAVIISLTTAFILKEQASKEVQQTRERLLSEAKATLQNYVAVGL 63

Query: 59  AYYQGLEAAGTLSREAAQQQALQVVRALRYDHDDYFWINDLGPKMIMHPANPKLDDQDLS 118
              + L  A T     A+ QA++++  + Y  D YF+  D     +    +P    +   
Sbjct: 64  TAIKPLYDAATPGDNEARAQAIKLLSNISYGKDGYFFGYDSETIRLFKANSPDGVGKSFK 123

Query: 119 AIRDPDGFAVFNEMVALARQQDAGPVNYRWPKPGASEPVAKTSYIQLFKPWGWIIGSGVY 178
             RDP+G  V  ++V +A+      + Y  P PG+ + V K  Y +    W   +GS V 
Sbjct: 124 DNRDPNGVYVNRDLVKVAKD-GTHYLEYSSPLPGSQDLVPKLGYTEYLSKWDLAVGSSVN 182

Query: 179 VDDVQAEFA---RQLRDA------SLVGVG--IALLMALVVMLIARSIARPLQEAVQAMG 227
           +D ++A+ A    ++ D       S+VG+   + L++A+V +L+A +I RPL      + 
Sbjct: 183 LDGIEAQVALVEAKVHDRVQGVILSIVGIAAVVLLVIAVVGLLLANAILRPLHLMKDNLD 242

Query: 228 NIASGESDLTRRLDTHGSDEITHLGEHFNRFNGKLQGVVGQLQGAAHALAQSAGHVGDNA 287
           +IA+GE DLTRRL     DE+  L   FNRF  K+ G+V Q+      L      V + A
Sbjct: 243 DIAAGEGDLTRRLTITSQDELGQLAGSFNRFVDKIHGLVRQITDMTSQLTGLVTQVSEQA 302

Query: 288 GAAQQRSAQQSLQMDQVATAVNEVTYAVQDVAKTAEQAAGEMRTAQQQVTHGQQAIHGSL 347
             ++Q   +Q  + DQVATA+NE++ A Q+VA++A+ AA   +   ++    ++ + GS+
Sbjct: 303 QRSEQAMERQRHETDQVATAINEMSSAAQEVARSAQGAAVAAQQTDEEGQSAKRVVAGSI 362

Query: 348 AQIDRLSLTIDEAVQVIRDLAGHSTRIGGVLDVIRSIAEQTNLLALNAAIEAARAGEQGR 407
            QI  L   I  +   +  L      I  VL VIRSIAEQTNLLALNAAIEAARAGE GR
Sbjct: 363 QQIHALVNDIRSSGVSLDSLQQDVASIVSVLGVIRSIAEQTNLLALNAAIEAARAGEAGR 422

Query: 408 GFAVVADEVRLLAQRTAQSTAEIHTMIEHLQSQSDAAVKAIDTSSEASRQTVEQAREAGA 467
           GFAVVADEVR LA RT QST EI  MI+ LQS + AAV+A+  SSEA   T E+A EAGA
Sbjct: 423 GFAVVADEVRALASRTQQSTQEIQGMIDRLQSGTHAAVEAMRRSSEAGDGTSERANEAGA 482

Query: 468 SLDAINQVLNNLTALNASIASATLQQSHVVEEINRNVLDTAGLSQQTADAARQSSDAGVA 527
           SLD + Q++  + ++NA IASA  +Q+ V EEINR+V   A      AD  +  +    +
Sbjct: 483 SLDTMAQLIGTINSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRS 542

Query: 528 LGRLSEELEQLLRQFRV 544
           L  L + L +L+ QFR+
Sbjct: 543 LADLGQRLGKLVGQFRI 559