Pairwise Alignments

Query, 544 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  399 bits (1026), Expect = e-115
 Identities = 217/542 (40%), Positives = 325/542 (59%)

Query: 3   TLRSMSISRRLWLILVVAVAMLVVLGLLMLRQIHGDLYQAKAEKTRHVVQTAAGVLAYYQ 62
           +LR +SI  RL+L+ VV + +L +   +M++    DL   K  +T+H+V++A  +L +Y 
Sbjct: 15  SLRHLSIRNRLFLLTVVILVLLAIPFAIMVKDYRHDLMLEKQVQTQHLVESAYTLLEHYA 74

Query: 63  GLEAAGTLSREAAQQQALQVVRALRYDHDDYFWINDLGPKMIMHPANPKLDDQDLSAIRD 122
                GTL+ E AQ  A Q +  LRY  +DYFWIND  P M+MHP  P L+ +DL + +D
Sbjct: 75  QQATQGTLTTEQAQNTAKQAIAQLRYGANDYFWINDAQPAMVMHPMKPDLNGKDLRSFKD 134

Query: 123 PDGFAVFNEMVALARQQDAGPVNYRWPKPGASEPVAKTSYIQLFKPWGWIIGSGVYVDDV 182
           P+G A+F EMV + ++   G V Y+WPKPGA +PV K SY++LFKPWGWIIG+G+YVDDV
Sbjct: 135 PNGKALFVEMVNVTQRNQQGVVEYQWPKPGAEQPVDKVSYVKLFKPWGWIIGTGIYVDDV 194

Query: 183 QAEFARQLRDASLVGVGIALLMALVVMLIARSIARPLQEAVQAMGNIASGESDLTRRLDT 242
            A   ++L    +  VG  L++ ++  LI RSI +P +E +  + NIA GE DLTR+L  
Sbjct: 195 NALVMQRLSSILVWVVGTLLVLIVLASLIGRSITQPCEETLATLKNIAQGEGDLTRQLTV 254

Query: 243 HGSDEITHLGEHFNRFNGKLQGVVGQLQGAAHALAQSAGHVGDNAGAAQQRSAQQSLQMD 302
            G DE+  + + FN F  K++ ++ ++     ++  SA  +   A +A  ++  Q   +D
Sbjct: 255 TGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYDQHQAVD 314

Query: 303 QVATAVNEVTYAVQDVAKTAEQAAGEMRTAQQQVTHGQQAIHGSLAQIDRLSLTIDEAVQ 362
            VA+A+N++  + Q+VA++A QA     +A Q  + G++ I  +  Q+  L   +    Q
Sbjct: 315 TVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLTRTEQ 374

Query: 363 VIRDLAGHSTRIGGVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQR 422
             + LA  +  +  VL+VIR +AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA R
Sbjct: 375 ETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLATR 434

Query: 423 TAQSTAEIHTMIEHLQSQSDAAVKAIDTSSEASRQTVEQAREAGASLDAINQVLNNLTAL 482
           T  ST EI  +I  LQ ++ +  +++  + + SR T +QA +A   L+ I   +  + + 
Sbjct: 435 TQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQIKTILSF 494

Query: 483 NASIASATLQQSHVVEEINRNVLDTAGLSQQTADAARQSSDAGVALGRLSEELEQLLRQF 542
           N  IA A+ QQS   +EI RN+   A  S Q +  A Q + A   L    + L + L  F
Sbjct: 495 NQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMENGQHLARSLAVF 554

Query: 543 RV 544
           ++
Sbjct: 555 KI 556