Pairwise Alignments

Query, 207 a.a., urease accessory protein from Pseudomonas putida KT2440

Subject, 264 a.a., hydrogenase accessory protein HypB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 52.8 bits (125), Expect = 6e-12
 Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 12/177 (6%)

Query: 17  GSGKTALLEALCKAMRDHYQIAVVTNDIYTKEDQRILTEAGALEPERIVGVETGGCPHTA 76
           GSGKT LLE L +  + +Y  AV+  D+ T  D   L   G    +    ++TG   H  
Sbjct: 84  GSGKTTLLEHLKEYTKLNY--AVIEGDLETSRDADRLIAKGIKAHQ----IQTGSACHL- 136

Query: 77  IREDASMNLAAVEALARKFGNLEVIFVESGGDNLSATFSPELADLTIYVIDVAEGEKIPR 136
              DA M   A+  L  +   +++ FVE+ G+ +            I ++ V EG+    
Sbjct: 137 ---DAFMVHGALHHLPLE--GVDICFVENVGNLVCPASYDVGTHKNIVLLSVPEGDDKIE 191

Query: 137 KGGPGITKSDFLVINKTDLAPYVGASLEVMERDTQRMRPQRPWTFSNLKKGEGLQAV 193
           K      ++D ++I K DL PY   S++  +   +++ P       ++K G+ + AV
Sbjct: 192 KYPVMFRRADLVLITKCDLLPYFDFSVDEAKTQLKKLNPNTQILEVSIKDGDSMHAV 248