Pairwise Alignments

Query, 292 a.a., Site-specific recombinase, phage integrase family from Pseudomonas putida KT2440

Subject, 298 a.a., tyrosine recombinase XerD from Pseudomonas stutzeri RCH2

 Score = 77.0 bits (188), Expect = 5e-19
 Identities = 68/232 (29%), Positives = 108/232 (46%), Gaps = 27/232 (11%)

Query: 53  DGFAPNSSSLYVNAIRGVMNEAWRQGLIDHEQLLRIREVKPATGSRLPP-GRNLRRSLIR 111
           +G+   S++ +++ +RG      R+G I  +  LR+          LP  GR L ++L  
Sbjct: 66  NGYKARSTARFLSGLRGFYRYLLREGEIAVDPTLRVD---------LPRLGRPLPKALSE 116

Query: 112 ELMDVCAADPR---PQGVRDAAIIALLYGTGMRKSESVDIDLDQVDFEARSLQVVGKGNH 168
             ++   A P    P G+RD A++ +LY  G+R +E + + L+QV      L+  GKGN 
Sbjct: 117 ADVEALLAAPDLGDPIGLRDRAMLEVLYACGLRVTELISLTLEQVSMRQGVLRTFGKGNK 176

Query: 169 QLVKYAPPWAFEKLQAWLELRRQDLPAGAEDDPFLFNRIRRGNHITRA----RITKHAIY 224
           + +      A   L+ +    R +L  G   D  LF  + RG+ +TR     RI  HA  
Sbjct: 177 ERLVPLGDEALHWLERYQREGRDELLGGKARD-VLFPSL-RGDQMTRQTFWHRIKLHA-- 232

Query: 225 YIARQRGAQVGVKIMPHDFRRAFITRVIEE-HDLSIAQKLAHHANIQTTAIY 275
                + A +   I PH  R AF T ++    DL   Q L  H+++ TT IY
Sbjct: 233 -----KVAGIATSISPHTLRHAFATHLLNHGADLRTVQMLLGHSDLSTTQIY 279