Pairwise Alignments

Query, 292 a.a., Site-specific recombinase, phage integrase family from Pseudomonas putida KT2440

Subject, 329 a.a., integrase/recombinase from Sinorhizobium meliloti 1021

 Score = 58.9 bits (141), Expect = 1e-13
 Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 27/197 (13%)

Query: 104 NLRRSLIRELMDVCAADPRP-QGVRDAAIIALLYGTGMRKSESVDIDLDQVDFEA-RSLQ 161
           +L R+ ++ L++  A D R   G+RD A++ L +  G+R SE V + LDQ D  +  S+ 
Sbjct: 123 SLSRTEVQALLN--APDRRSLSGIRDRAMLHLAFAGGLRVSELVGLTLDQFDGRSPASIH 180

Query: 162 VVGKGNHQLVKYAPPW--AFEKLQAWLELRRQDLPAGAEDDPFLFNRIRRGNHITRARIT 219
           ++GKG  + V   P W      ++AW+ +R    P   +   FL N    G  +TR+   
Sbjct: 181 IIGKGRRERV--LPLWQETAAAIRAWIAVR----PKNGDTALFLNN---AGRMMTRSGFE 231

Query: 220 KHAIYYIARQRGAQVGV-------KIMPHDFRRAFITRVIE-EHDLSIAQKLAHHANIQT 271
               Y + +   A V V        I PH  R +    +++   D+        HA++Q+
Sbjct: 232 ----YILEKHAAAAVSVAPTLATKSISPHVLRHSCAMHMLQATRDIRKVALWLGHASLQS 287

Query: 272 TAIYDRRDDNERRRAVD 288
           T IY R D  E+   +D
Sbjct: 288 TEIYLRADPTEKLEMLD 304