Pairwise Alignments

Query, 393 a.a., putative Membrane protein from Pseudomonas putida KT2440

Subject, 390 a.a., NnrS family protein (RefSeq) from Shewanella loihica PV-4

 Score =  246 bits (629), Expect = 6e-70
 Identities = 158/398 (39%), Positives = 217/398 (54%), Gaps = 21/398 (5%)

Query: 4   QPTASRPRQAVWSLSFRPFFLGGSLFALTALLLWAGVLAGAPAPAPPGGMLAWHRHEMLF 63
           +P   +P+ A+  L FRPFFL G+LF+L AL LW   L G     P G  L WH HEMLF
Sbjct: 6   EPAHLQPKLALLRLGFRPFFLFGALFSLVALALWGSFLTGRLGFTPHGNPLWWHGHEMLF 65

Query: 64  GFAAAIIAGFLLTAVQNWSGIPGLSGRALQGLFLLWLLGRVSWFMPLPGS--LLVLVEGS 121
           GF  AI+AGFLLTA Q W+G   + G  L  LFLLWL  R+       GS  ++ +++  
Sbjct: 66  GFVMAIVAGFLLTASQTWTGQKSIKGWPLGALFLLWLAPRILLANNQWGSFEVVAMLDLL 125

Query: 122 FLPLVALSLARPVLQRRLRNNYPIVVLVLLIAACQWLTLAGWLHQDELWQRRGIFAGLWL 181
           F P  AL LAR V+  +   N+  + ++LL+     L+  G   Q+ L           L
Sbjct: 126 FAPAAALVLARQVIAVKQWRNFAFIPILLLLTVANALSYYGVSSQNSLLVSHAFHGATIL 185

Query: 182 VTAMMTVLGGRVIPFFTRRGLGQLDAAPARPWLDRACLLLSVAVPLAFATGLADTPQASL 241
           +  ++ ++GGRVIPFFT R   Q        WL++   +  +A+ +A   G       SL
Sbjct: 186 MVTIVALIGGRVIPFFTDRAT-QWQRLDNISWLEKLTFVSLMALFIAMLIG------QSL 238

Query: 242 AVLFFALFALHATRLVLWHDRGL---WRVPLLWSLHLAYAWLALACLGMALWHSGVALNP 298
           A++  A  A   T LV W   G+   + VPLLWSLHL+Y      C+ + L    V  + 
Sbjct: 239 AIMLCAAVA-GITLLVRWSRWGVQSTFGVPLLWSLHLSY-----LCIPVGLLLIAVGASV 292

Query: 299 SLVTHALTVGAMTGLILAMMARVSLGHTGRPLQVPTSIAWAFALMQLATLARVILPLFTS 358
           S   HA+TVG + G+ILAMMARVSLGHTGR L  P  +  AFAL+ ++T+ RV+  LF +
Sbjct: 293 SAGLHAMTVGGLGGMILAMMARVSLGHTGRNLLPPKVMTGAFALILISTITRVLASLFPA 352

Query: 359 ---LGVSVSALCWSLALLLFLRHYLPILLRPRADGMPG 393
              L ++++ + W  A   F+  Y PILL PR DG PG
Sbjct: 353 QFMLWLTIALVAWIFAFGTFVICYAPILLTPRVDGRPG 390