Pairwise Alignments

Query, 762 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 650 a.a., DNA helicase, Rad3 from Dechlorosoma suillum PS

 Score = 67.8 bits (164), Expect = 2e-15
 Identities = 158/618 (25%), Positives = 246/618 (39%), Gaps = 77/618 (12%)

Query: 181 GLLALSFPYPQFRKGQRQLAETLYKAVSTGRCLMAQASTGIGKTLGTLFPLLKAMVPQQL 240
           G L+ + P  + R  Q ++AE +  A++  R L+A+A TG GKT   L P L +      
Sbjct: 19  GPLSANIPGYRTRSQQVEMAEKIAAAIADNRMLVAEAGTGTGKTYAYLVPALLSG----- 73

Query: 241 DKLFFLTA-KTPGRALALDALRQITDATPQPALRTLELIARDKACEYPDKACHGESCPLA 299
            K+   T  KT    L    +  +  A   P    L     +  C Y     H +   L 
Sbjct: 74  GKVIVSTGTKTLQDQLFNKDIPTVRAALKAPVKVALLKGRANYVCPY-----HLDRSLLD 128

Query: 300 AGFYDRLPAAR--------------EAAAALPLLDRA-------NLREVALAHQVCPYYL 338
             F +R   A               + A  L + + A       + RE  L  Q CP++ 
Sbjct: 129 GRFQNREDVAYIQKIARFAKETRSGDKAECLDVPENATAWIMATSTRENCLG-QECPHHK 187

Query: 339 ------GQEMARWADVLVADYNYYF-DAHALLFGLTQLNQWRVAVLVDEAHNLVERGRGM 391
                  ++ A  ADV+V +++ +F D      G+ +L     AV+ DEAH L E     
Sbjct: 188 ECFVLQARKEALSADVVVVNHHLFFADVMLKDEGMAELLPACNAVIFDEAHQLPETASLF 247

Query: 392 YSASLDQGQLLAL-RQSKPPGLVSALDRLNRQWNALYKEQRAPYQASESLPEGLLRALQQ 450
           +  S    Q+L L R ++  GL SA D L+ Q      ++ A         E    A  Q
Sbjct: 248 FGDSFSTSQVLDLARDARSEGLASARDCLDLQEATRIVDKAAKDLRLTVAVEPARYAWGQ 307

Query: 451 CVGVIQEQMNQAPTHIDPQVLQFYYQ-------ALQFC--RVAELFDEHFLFDISQRQGP 501
             G  Q     A    + ++L    +        L+ C  R  EL      +   Q    
Sbjct: 308 LEGNAQFLDGLANLEKELELLNAILENQAERSEGLENCWRRNGELLQRLIQWRQEQPGVV 367

Query: 502 RKRRLATLCLR-NVTP---ARLLAPRMQAARSVTLF-SATLSPR----HFYSDLLGMPAD 552
           R        L+ N TP   ARL   ++       +F SATL+ +    H+ ++L    A+
Sbjct: 368 RWGEAFNHSLQLNATPLDVARLFRKQLDGHPRAWIFTSATLAVQADFSHYCNELGLWDAE 427

Query: 553 TAWLDVAAPFRAEQLEVRIASQVSTRYQQRQASLAPIVDLIARQYERMPGNYLAFFSSFE 612
           +A  +  +PF   Q  V  A +              +V+      +   G      +S  
Sbjct: 428 SARWE--SPFDYGQQAVLYAPR-DIPDPNLPGFTEAVVEAAWPALKACGGGAFFLCTSLR 484

Query: 613 YLQQVAGLLA---EQHG-QIPLWSQEPGMDEAARQAFLDRFVADGRGVGFAVLGGA--FG 666
            +++   LLA   E  G ++PL  Q     E ++   L+RF    R +G AVL G+  F 
Sbjct: 485 AMRRTHELLAAKLEDEGLEMPLLLQ----GEGSKTELLERF----RRLGNAVLVGSQSFW 536

Query: 667 EGVDLPGTRLIGAFVATLGL-PQVNPVNEQFKQRLGRQFGAGFDYAYLYPGVRKVIQAAG 725
           EGVD+ G  L    +  L   P  +PV +   +++ ++  + F    L   V  V Q AG
Sbjct: 537 EGVDVRGEALSLVVIDKLPFAPPDDPVLKARVEQMEKEGRSAFMEYQLPRAVINVKQGAG 596

Query: 726 RVIRGDQDRGVLVLIDER 743
           R+IR + DRGVL++ D R
Sbjct: 597 RLIRDETDRGVLMICDPR 614