Pairwise Alignments

Query, 762 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 636 a.a., ATP-dependent helicase from Klebsiella michiganensis M5al

 Score = 54.7 bits (130), Expect = 1e-11
 Identities = 145/613 (23%), Positives = 229/613 (37%), Gaps = 95/613 (15%)

Query: 193 RKGQRQLAETLYKAVSTGRCLMAQASTGIGKTLGTLFPLLKAMVPQQL--------DKLF 244
           R+ QRQ+A  +  A+   R L+ +A TG GKT   L P L+A     +        D+L+
Sbjct: 21  REPQRQMAFAVASAIEETRPLVVEAGTGTGKTYAYLAPALRANKKVIISTGSKALQDQLY 80

Query: 245 FLTAKTPGRAL----------------ALDALRQITDATPQPALRTLE--LIARDKACEY 286
                T  +AL                 L+ L Q   A     ++TL   ++ R  + + 
Sbjct: 81  SRDLPTVAKALKYTGKLALLKGRSNYLCLERLEQQALAGGDLPVQTLSDVILLRSWSNQT 140

Query: 287 PDKACHGESCPLAAGFYDRLPAAREAAAALPLLDRAN---LREVALAHQVCPYYLGQEMA 343
            D            G      +  E + A PL+   N   L      ++ C     ++ A
Sbjct: 141 VD------------GDISTCVSVAEDSQAWPLVTSTNDNCLGSDCPLYKDCFVVKARKKA 188

Query: 344 RWADVLVADYNYYF-DAHALLFGLTQLNQWRVAVLVDEAHNLVERGRGMYSASLDQGQLL 402
             ADV+V +++ +  D      G  +L      ++ DEAH L +     +  SL   QLL
Sbjct: 189 MDADVVVVNHHLFLADMVVKESGFAELIPEAEVMIFDEAHQLPDIASQYFGQSLSSRQLL 248

Query: 403 ALRQS----------KPPGLVSALDRLNRQWNAL--------YKEQRAPYQASESLPEGL 444
            L +               L    DRL +             Y+       A  ++   L
Sbjct: 249 DLAKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGEPGYRGNLRELLADHNIQRAL 308

Query: 445 LR---ALQQCVGVIQEQMNQAPTHIDPQVLQFYYQALQFCRVAELFDEHFLFDISQRQGP 501
           L    AL+ C  V +  + ++   +D    +      +  R+ E     F +        
Sbjct: 309 LLLDDALELCYDVAKLSLGRSAL-LDAAFERATLYRGRLKRLKETSQPGFSYWYECTS-- 365

Query: 502 RKRRLATLCLRNVTPARLLAPRM-QAARSVTLFSATLSPR---HFYSDLLGMPADTAWLD 557
              R  TL L  +T A      M Q + S    SATLS     H ++D LG+  +   L 
Sbjct: 366 ---RTFTLALTPLTVADKFKEVMAQKSGSWIFTSATLSVNDDLHHFTDRLGI-GEAQTLL 421

Query: 558 VAAPFR-AEQLEVRIASQVSTRYQQRQASLAPIVDLIARQYERMPGNYLAFFSSFEYLQQ 616
           + +PF  A Q  + +   +    Q   A    +  ++    E   G      +S   ++ 
Sbjct: 422 LPSPFDYAHQALLCVPRNLPLPNQPGAAR--HLAAMLKPLIEANDGRCFMLCTSHAMMRD 479

Query: 617 VAGLLAEQHGQ---IPLWSQEPGMDEAARQAFLDRFVADGRGVGFAVLGGAFGEGVDLPG 673
               LAEQ      +P+  Q     E ++   L +FV+ G  +   V   +F EGVD+ G
Sbjct: 480 ----LAEQFRATMTLPVLLQ----GETSKGQLLQQFVSAGNAL--LVATSSFWEGVDVRG 529

Query: 674 TRLIGAFVATLGLPQVNPVNEQFKQRLGR---QFGAGFDYAYLYPGVRKVIQAAGRVIRG 730
             L  + V    LP  +P +   K R+     + G  FD   L   V  + Q  GR+IR 
Sbjct: 530 DAL--SLVIIDKLPFTSPDDPLLKARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRLIRD 587

Query: 731 DQDRGVLVLIDER 743
             DRGVLV+ D R
Sbjct: 588 VTDRGVLVICDNR 600