Pairwise Alignments

Query, 452 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 509 a.a., DNA-binding protein from Burkholderia phytofirmans PsJN

 Score = 79.0 bits (193), Expect = 3e-19
 Identities = 105/433 (24%), Positives = 165/433 (38%), Gaps = 70/433 (16%)

Query: 33  RLPSLRELSRRLRVSLATVQSAYSLLEEEGRVHCLPRSGYYVQ--------NGGKDQAVA 84
           R+P+LR L+ +L  +  TV+ AY++L +EG +     +G +V            + Q V 
Sbjct: 42  RVPALRGLATQLNTARGTVELAYTILVDEGYLQMRGAAGTFVSASLPASVTRSSRAQGVQ 101

Query: 85  LAR-----------QPP--------LPTQPLLERMLLGHER------------------R 107
            AR           QPP         P Q  L   + G  R                  R
Sbjct: 102 AARARQGAAGADSPQPPPESRDGRAAPRQAALTVAMSGEPRPLQPGLPALDAFPRKVWNR 161

Query: 108 LARQRDRS-----VASWEALGSARLRNAVAERYTRCSNQYWHADDVHLAPDVLALLETLL 162
           L  QR RS     +A  +  G   LR  +A             + V +     A LE +L
Sbjct: 162 LVAQRARSGERAMLAYPDPSGYRPLREHIATYLGLSRGVTCLPEQVFVTGGFRATLELVL 221

Query: 163 AALALQGGTALVHSPCCWQVLRALARAGMRVLEAPLDARGNPELHALAKLLGSEPVSLLI 222
            +LA          P        L   G++++  P+D  G         LL ++    ++
Sbjct: 222 RSLARADDRVWFEDPGYLLARDFLTETGVQLVPVPVDGEGIDV--ERGTLLDAQARFAVV 279

Query: 223 MPSCLGMPQGRLVSPYYQQQLGLLLGQHPVWLLENDLDSELCYDGPPSTRLRDWIDPRWL 282
            PS    P G  +S   +  L    G+   W++E+D DSE  Y G P   L+       +
Sbjct: 280 TPSHQS-PLGHTLSLARRMALLDWAGKASRWIIEDDYDSEFRYLGRPLPALKSLDRRDRV 338

Query: 283 LVMGTFEAAVGAEAPYAYLLSHDTVLAKAFAERAFRLA-------PLRLQ-ALAHMLGKG 334
           +  GTF   +      AY+     V+ +   ER  ++A       P+ LQ A+A  + +G
Sbjct: 339 IYCGTFSKVMFPGLRLAYV-----VVPERAVERVGKVAHSMNAGSPMLLQAAVADFIAQG 393

Query: 335 EIETQLGQQRTDLQRRTQYLAHVLQSQFGQRVVFDIPQGGQMLWVSFCQ----PLAWDGI 390
                L + R     R   + H L+  FG+R++ D+P GG    V F +    P+    +
Sbjct: 394 HFARHLKRMRALYAERRVLIVHALEKAFGERLIVDLPPGGIQFAVQFAEGPDGPVDDVAV 453

Query: 391 AAALAGSALHALP 403
           AA    + L  LP
Sbjct: 454 AARARKAGLAVLP 466