Pairwise Alignments

Query, 452 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 470 a.a., GntR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 98.2 bits (243), Expect = 5e-25
 Identities = 119/478 (24%), Positives = 196/478 (41%), Gaps = 63/478 (13%)

Query: 12  YRKVYRYLEALIEQAAGVGTCRLPSLRELSRRLRVSLATVQSAYSLLEEEGRVHCLPRSG 71
           Y+++ + L+  I Q       +LPSLR+      +SL TV +AY LLE +G +    +SG
Sbjct: 4   YQQLAQDLKNRISQGVWQAGDKLPSLRQTVTDSGLSLMTVLNAYQLLESQGVILAQAKSG 63

Query: 72  YYVQ-------------------------------NGGKDQAV----ALARQPPLPTQPL 96
           Y V                                   K   +    +    P L  Q  
Sbjct: 64  YIVAPQPEAFRYPETQRQIYFSDRLDINEFVFNVLQASKQAGIVPFGSAFPDPSLFPQQA 123

Query: 97  LERMLLGHERRLARQRDRSVASWEAL-GSARLRNAVAERYTRCSNQYWHADDVHLAPDVL 155
           L R L+    ++ RQ   S A+     G+A LR A+++RY +        D++ +    +
Sbjct: 124 LARSLV----KVTRQMSPSFAADNLPPGNAGLRKAISQRYAKLGMSV-APDEILITSGAM 178

Query: 156 ALLETLLAALALQGGTALVHSPCCWQVLRALARAGMRVLEAPLDARGNPELHALAKLLGS 215
             L   LAALA  G   ++ SP  +  ++A+ R  +R +    D R   +L+ALA++L +
Sbjct: 179 EALNLSLAALAQAGDWVVIESPTFYGAMQAIERLKLRAIAVATDPREGIDLNALAEVLKT 238

Query: 216 EPVSLLIMPSCLGMPQGRLVSPYYQQQLGLLLGQHPVWLLENDLDSELCYDGPPSTRLRD 275
            PV    + S    P G  +S   +Q +  LL +H V L+E+D+  EL Y G  + R   
Sbjct: 239 YPVKACWLMSLHQNPLGCSLSDQKKQAVYQLLCEHNVSLIEDDVYQEL-YVGSSAPRPIK 297

Query: 276 WIDPR-WLLVMGTFE-----------AAVGAEAPYAYLLSHDTVLAKAFAERAFRLAPLR 323
            +D +  +L  G+F             A G  AP    L   + L+ +        AP++
Sbjct: 298 ALDTQGCVLHCGSFSKSLIAGYRVGWVAAGRHAPQLQRLQLMSTLSTS--------APMQ 349

Query: 324 LQALAHMLGKGEIETQLGQQRTDLQRRTQYLAHVLQSQFGQRVVFDIPQGGQMLWVSFCQ 383
           L A+A  +   + E  L + R  L  R   +  +L++   + V  +   GG  LW++   
Sbjct: 350 L-AIADFIQSPQYERHLKRLRHTLADRKFAMYQLLRAHLPESVSVNFEPGGYFLWLALPS 408

Query: 384 PLAWDGIAAALAGSALHALPGEQFGLPGHYPQHLALIWLGGRPDELQLAVRRLAQALE 441
            +    I  +     +   PG  F     +   + +        EL  AV+ LAQ LE
Sbjct: 409 HMDATQIYHSALERGISIAPGNLFSNQAEFRHFMRINASYDCSPELVRAVKALAQILE 466