Pairwise Alignments

Query, 155 a.a., putative Integrase from Pseudomonas putida KT2440

Subject, 411 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

 Score = 50.1 bits (118), Expect = 4e-11
 Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 9/149 (6%)

Query: 3   KSLAGFRGALNNHILPTIGSIPVSEIKLDHIIEIIATLRRARTLAMAKRVRTIIRAVLGF 62
           K+L G    L  +  P +GSIPVS++     I  +  +     L   KR   ++  ++ +
Sbjct: 122 KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY 181

Query: 63  AEGRGWVERNVALSNTEELKVRHVVTSNPAIERPADLGEFLLRLDELSPSSISIAMRLLV 122
           A   G +  N  L+   ++  +H V    A++ P ++ +    +  ++ ++I    R L+
Sbjct: 182 AVNSGVIHAN-PLAGIRDVFKKHKVVHMKALQ-PHEMHDL---IRTVATANIQHVTRFLI 236

Query: 123 ----MLPVRPGELVKMRWEDVDLVSADWV 147
                  VRP E    RWE++D+V+  W+
Sbjct: 237 EWQLHTMVRPNEASGARWEEIDMVNKLWI 265