Pairwise Alignments

Query, 155 a.a., putative Integrase from Pseudomonas putida KT2440

Subject, 422 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

 Score = 43.1 bits (100), Expect = 5e-09
 Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 9/140 (6%)

Query: 11  ALNNHILPTIGSIPVSEIKLDHIIEIIATLRRARTLAMAKRVRTIIRAVLGFAEGRGWVE 70
           +L  HI P I   PV  I    IIE++  +    +L   KR+   +  V+ FA   G ++
Sbjct: 133 SLELHIFPHISDKPVKAITAPEIIELLKPIEAKGSLETVKRLTQRLNEVMNFATNCGLIQ 192

Query: 71  RNVALSNTEELKVRHVVTSNPAIERPADLGEFLLRLDELSPSSISIAMRLLVMLPV---- 126
            N         K       N A   PA+L E    +  ++ +SI    R L+   +    
Sbjct: 193 ANPLTGIKAAFK--KPKKENMAALTPAELPEL---MSAIANASIKRTTRCLLEWQLHTMT 247

Query: 127 RPGELVKMRWEDVDLVSADW 146
           RP E    RW++++     W
Sbjct: 248 RPAEASGARWDEINWEEKVW 267