Pairwise Alignments

Query, 468 a.a., Outer membrane protein OprJ from Pseudomonas putida KT2440

Subject, 495 a.a., RND transporter from Burkholderia phytofirmans PsJN

 Score =  193 bits (491), Expect = 1e-53
 Identities = 149/496 (30%), Positives = 240/496 (48%), Gaps = 39/496 (7%)

Query: 4   MVNRVLPI-----VLALTLAG-----CSLTPTYQRPEAPVAAEWGDAAGHTG-------- 45
           M+N  LP       LA TL G     CS  P YQRP A + A++  A  HTG        
Sbjct: 1   MINLPLPRSLPRRALAATLIGALLSACSTLPAYQRPSADIPAQYAGAV-HTGAVQASDTP 59

Query: 46  --------HSVEQLDWQAFIVDPVLRQLVGTALDNNRSLRQTLLDIEQARAQYRIQRADR 97
                    S  +  W     DPVL +L      +N+++R+ +  ++QAR+    QRA  
Sbjct: 60  GWAQAAPADSTPRGPWWTIFNDPVLNELEARIDVSNQTVRKAVAQVQQARSMVDYQRAGF 119

Query: 98  VPGLNASASGNRQHLPAALSSDGREGVS-STYQVGLSLPEYEVDLFGRVKSLSDAALEQY 156
            P + A  + +R      +      G +   Y  G+S   +E DLFGRV+     A    
Sbjct: 120 FPTITAGVAQDRYRTSQNVEGKSLAGKTVPDYSAGVSA-SWEPDLFGRVRDSVTGAQADA 178

Query: 157 LATEEVGRAARIALIAEVSQAYLALDGAERRQALTRQTLASREDSLALVGQRRAAGTATA 216
            A+E      R+++ A+++  Y +L   + ++ L   ++ +   +L L+ Q+ + G   A
Sbjct: 179 QASEADLEGVRLSMSADLAADYFSLRSLDTQKKLLDDSVNAYAAALKLLQQQLSNGAIDA 238

Query: 217 LDHQEALGLVEQSRAE---LEVTVRQQRQAYNALVLLLGSAEAAKAMPAERPDEPMVLND 273
               +A   +E +R +   ++VT   + Q  +A+  L+G   +   +P   P+   V   
Sbjct: 239 SAVAQATTQLEATRTQDTDIDVT---RAQLQHAIATLIGEPASTFTLP---PNGTAVTPP 292

Query: 274 IVP-GAPSALIERRPDILAAEHRLRARNADIGAARAAFFPRISLTGSFGTASAQMSGLFD 332
            +P G PS L+ERRPDI AAE R+ + NA IG A AAFFP + L+ S G  S   +    
Sbjct: 293 AIPIGVPSQLLERRPDIAAAERRVASANAQIGVAHAAFFPDLVLSASAGLESTFFAPWLS 352

Query: 333 GGSRSWAFMPQLSLPLFDAGRNRAGLSLAEARKDSAVAAYEGAIQVAFREVADALAATDT 392
             S  W+  PQL+  LFD G+ +A L  A A+ D AVA Y  ++ VAF++V D L+A  +
Sbjct: 353 APSLFWSLGPQLAGTLFDGGKRKATLHGATAQYDGAVADYRQSVLVAFQQVEDNLSALHS 412

Query: 393 LRREQAARRALADTSRETLTLAKARYEGGVDNHLRYLDAQRNSYVNEAAFIEASTQRQLA 452
           L  E A+++     +  +L L   R+  G  ++L  + AQ  +  N+    + + ++  +
Sbjct: 413 LADEAASQQRATTAADLSLRLTTNRFNAGAVSYLDVVTAQTIALTNQRIADQIAARQLES 472

Query: 453 LVNLFRALGGGWPSKG 468
            V L +ALGG W ++G
Sbjct: 473 SVLLLKALGGTWGAEG 488