Pairwise Alignments

Query, 378 a.a., Multidrug efflux RND membrane fusion protein MexC from Pseudomonas putida KT2440

Subject, 409 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

 Score =  182 bits (463), Expect = 1e-50
 Identities = 131/378 (34%), Positives = 187/378 (49%), Gaps = 12/378 (3%)

Query: 7   SIRVGALAMAIAL-AGCEPAAEQDGAANASYPVEIVTLAPEQVALAAELPGRVEPMRVAE 65
           ++R   +A+ + + A C  A E   +      V +  +  +QV    EL GR+E     E
Sbjct: 7   ALRFPLIALTVLITAACGKAPEATQSGMPPPAVSVAEVIEQQVTEWDELTGRLEAPESVE 66

Query: 66  VRARVPGIVLHKRFEEGADVKAGDVLFQIDPAPFKAALARAEADLARAQAVQQEAQARVK 125
           +R RV G +    FEEGA VK GD+LFQIDP PF+A + R +A L +A+A+QQ   A  +
Sbjct: 67  IRPRVSGFIDKAAFEEGALVKKGDLLFQIDPRPFQAEVKRLQAQLQQARAIQQRTVAEAE 126

Query: 126 RYEPLVKIEAVSQQDFD---SATAELRSAGAAVRSAQADVQAARLNLGYATVTAPISGRI 182
           R E L +  A+S +  D   SA +E RSA AA+   QA +  A+L+L +  VTAPI GR+
Sbjct: 127 RGERLRQKNAISAELADARVSAASEARSATAAI---QAQLDRAQLDLSFTRVTAPIDGRV 183

Query: 183 GRALATEGALVGQGEATLMARIQQLDPIYIDFTQSAADALRLRQALKDGALSADSQRLTA 242
           GRAL T G LV   EA L+  +   D +Y  F       L+ R+  ++G     +     
Sbjct: 184 GRALITSGNLVNASEA-LLTTLVSTDKVYAYFEADERTYLKYRELARNGDRGETTPVYLG 242

Query: 243 QVEGTDFQRSGELMFTDVSVDRGTGQVILRGRFDNADGTLLPGMYVRVRTPQGTDNHAIL 302
                     G + F D  VD  TG +  R  FDN DG+  PG+Y R++        A+L
Sbjct: 243 LSSEDGHPHLGHMDFVDNQVDPRTGTIRGRAVFDNRDGSFTPGLYARLKLVGSATYDAVL 302

Query: 303 VPQRAVQRGSD-GQARVLV-ATNGIAEARAVRTGVMQGSRWQITEGLEPGDQVIVGSPAG 360
           +   AV  G+D G+  VLV A +G    R V  G        +  GL  G+ ++V     
Sbjct: 303 IKDVAV--GTDLGKKFVLVLAEDGTVAYRPVELGPKLEGLRIVRSGLAKGESIVVNGLQR 360

Query: 361 LAPGMPVAPAQKQTAAAQ 378
           + PG PV P     A A+
Sbjct: 361 VRPGSPVQPESVPMADAE 378