Pairwise Alignments

Query, 378 a.a., Multidrug efflux RND membrane fusion protein MexC from Pseudomonas putida KT2440

Subject, 386 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score =  264 bits (674), Expect = 4e-75
 Identities = 161/371 (43%), Positives = 224/371 (60%), Gaps = 17/371 (4%)

Query: 16  AIALAGC---EPAAEQDGAANASYPVEIVTLAPEQVALAAELPGRVEPMRVAEVRARVPG 72
           A+ LA C   EP  E          V  + +    V L  ELPGRV  +R AE+R +V G
Sbjct: 17  ALTLAACGGGEPPQEMPPPI-----VSTIVVETRPVHLEDELPGRVSALRTAEIRPQVGG 71

Query: 73  IVLHKRFEEGADVKAGDVLFQIDPAPFKAALARAEADLARAQAVQQEAQARVKRYEPLVK 132
           IVL + FE+GA+V+AG  LFQI+PAPFKA +  A + L RA A  + A+ +V R +PLV 
Sbjct: 72  IVLRRLFEQGAEVQAGQPLFQINPAPFKAEVDSAASALKRAVAAMERAKLQVDRLKPLVN 131

Query: 133 IEAVSQQDFDSATAELRSAGAAVRSAQADVQAARLNLGYATVTAPISGRIGRALATEGAL 192
            +AVSQQ FD A ++   + A V  A+A +   +L+L +AT+ +PI+GRIG  L TEGAL
Sbjct: 132 ADAVSQQLFDDALSQYNQSSADVAQAKAALARRQLDLDFATIRSPIAGRIGEELVTEGAL 191

Query: 193 VGQGEATLMARIQQLDPIYIDFTQSAA--DALRL---RQALKDGALSADSQRLTAQVEGT 247
           VGQ +A  MAR+QQ+D +Y+D  Q A+  +A+R    + A  DG    + + L AQ  G 
Sbjct: 192 VGQSDANPMARVQQIDQVYVDVRQPASMLEAIRKSAGQSASSDGGKDGNVKILDAQ--GN 249

Query: 248 DFQRSGELMFTDVSVDRGTGQVILRGRFDNADGTLLPGMYVRVRTPQGTDNHAILVPQRA 307
            +  SG ++F+ ++VD GTG V++R R +N +  LLPGM+VR R PQG D   +LVPQ+ 
Sbjct: 250 PYPVSGHILFSGINVDAGTGDVVIRIRVNNPERHLLPGMFVRARVPQGGDIQGLLVPQQV 309

Query: 308 VQRGSDGQARV-LVATNGIAEARAVRTGVMQGSRWQITEGLEPGDQVIVGSPAGLAPGMP 366
           V R S GQARV +V  +G A  + V  G +   ++ +  GL  G++VIV     L PGMP
Sbjct: 310 VSRSSTGQARVWVVGQDGKAGVKNVELGKLVERQYLVRSGLAAGERVIVEGQDRLQPGMP 369

Query: 367 VAPAQKQTAAA 377
           V+ AQ    AA
Sbjct: 370 VS-AQPWALAA 379