Pairwise Alignments

Query, 378 a.a., Multidrug efflux RND membrane fusion protein MexC from Pseudomonas putida KT2440

Subject, 379 a.a., MexX family efflux pump subunit from Klebsiella michiganensis M5al

 Score =  273 bits (697), Expect = 8e-78
 Identities = 160/365 (43%), Positives = 223/365 (61%), Gaps = 8/365 (2%)

Query: 16  AIALAGCEPAAEQDGAANASYP-VEIVTLAPEQVALAAELPGRVEPMRVAEVRARVPGIV 74
           AI L+GC+ +   DG  +A  P V +  +    +++  ELPGR    RVAEVR +V GI+
Sbjct: 17  AILLSGCDNSG--DGQPHAQIPQVSVYVVHSAPLSVTTELPGRTSAYRVAEVRPQVNGII 74

Query: 75  LHKRFEEGADVKAGDVLFQIDPAPFKAALARAEADLARAQAVQQEAQARVKRYEPLVKIE 134
           L + F EG+DV AG  L+QIDPA ++AA    + D A+A+A    A   VKRY PL+  +
Sbjct: 75  LQRNFVEGSDVSAGQSLYQIDPATYQAAYNSTKGDEAKAEAAAAIAHLTVKRYAPLLGTK 134

Query: 135 AVSQQDFDSATAELRSAGAAVRSAQADVQAARLNLGYATVTAPISGRIGRALATEGALVG 194
            +SQQ++D A A  R A A V +A+A V++AR+NL Y  VT+PISGRIG++  TEGALV 
Sbjct: 135 YISQQEYDQAVATARQADADVIAAKAAVESARINLAYTKVTSPISGRIGKSSVTEGALVT 194

Query: 195 QGEATLMARIQQLDPIYIDFTQSAADALRLRQ-ALKDGALSADSQRLTAQVEGTDFQRSG 253
            G+A  MA +QQLDPIY+D T+S+ D +RL+Q +L+ G  + + Q +     G  +   G
Sbjct: 195 NGQADAMATVQQLDPIYVDVTESSNDFMRLKQESLQHGNDTKNVQLI--MENGQPYTLQG 252

Query: 254 ELMFTDVSVDRGTGQVILRGRFDNADGTLLPGMYVRVRTPQGTDNHAILVPQRAVQRGSD 313
            L F+DV+VD  TG + LR  F N    LLPGM+VR R  +G   +AILVPQ+ V R   
Sbjct: 253 ALQFSDVTVDESTGSITLRAIFPNPQHALLPGMFVRARIDEGVSPNAILVPQQGVTRTPR 312

Query: 314 GQARV-LVATNGIAEARAVRTGVMQGSRWQITEGLEPGDQVIVGSPAGLAPGMPVAPAQK 372
           G+A V LV      E RAV      G +W +T GL+ G++VIV     + PG+ V  A++
Sbjct: 313 GEASVMLVNDKNQVETRAVTAAQAIGDKWLVTSGLKAGEKVIVSGLQKVRPGVTV-KAEE 371

Query: 373 QTAAA 377
            TA +
Sbjct: 372 DTATS 376