Pairwise Alignments

Query, 804 a.a., putative Transporter from Pseudomonas putida KT2440

Subject, 1041 a.a., cation/multidrug efflux pump AcrB from Caulobacter crescentus NA1000

 Score = 55.1 bits (131), Expect = 2e-11
 Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 5/153 (3%)

Query: 646 ALLVFAVYRDLRAVLVCCLPLTIGTFIGYWFMKELQIGLTIATLPVMVLAVGIGVDYAFY 705
           +L+VF   R+ RA L+  L + +     + FM  +   L + TL  + L +GI VD A  
Sbjct: 358 SLVVFLFLREWRATLITALAMPVSLVPTFAFMAFMGFSLNVVTLLALTLVIGILVDDAVV 417

Query: 706 IYNRLQLHLAHGQSITKAVEHALLEVG---VATIFTAITLAVGVATWAFSELKFQADMGK 762
               ++  +A GQ   +A       +G   VAT FT + + V V+       +F  + G 
Sbjct: 418 EIENIEKRVARGQRPFQAAMEGADAIGLAVVATTFTIVAVFVPVSFMPGMPGQFFKEFGL 477

Query: 763 LLAFMFIVNMVMAMTVLPAFAVWLERVFPRKRP 795
            +A   + ++V+A  + P  A +  +  P K P
Sbjct: 478 TVAVAVLFSLVVARLLTPLLAAYFLK--PAKAP 508



 Score = 30.4 bits (67), Expect = 5e-04
 Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 3/91 (3%)

Query: 351 SFVTLLLIPIPMVREVAITASLGVAYKIITNLLMLPLLASMLRVDDRYAAAQEVSRQRRT 410
           + +T L +P+ +V   A  A +G +  ++T LL L L+  +L VDD     + + + R  
Sbjct: 371 TLITALAMPVSLVPTFAFMAFMGFSLNVVT-LLALTLVIGIL-VDDAVVEIENIEK-RVA 427

Query: 411 RWLRGLARLAEWRNAQWVLGVALVVFLVAIW 441
           R  R      E  +A  +  VA    +VA++
Sbjct: 428 RGQRPFQAAMEGADAIGLAVVATTFTIVAVF 458