Pairwise Alignments

Query, 548 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

Subject, 680 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  146 bits (369), Expect = 2e-39
 Identities = 172/674 (25%), Positives = 259/674 (38%), Gaps = 177/674 (26%)

Query: 25  FETETLNGSFDSTITAGMGLRTESRG----CNLINQ-----------GPTGHNVPSGCLA 69
           F+   + GSFDST TAG   R   R        +NQ           G T +   +   A
Sbjct: 34  FDWGAVQGSFDSTWTAGASWRVGERDWAGQIGKVNQPQFDWSNYTAFGNTKYT-SAEIWA 92

Query: 70  QSSGVADQGDLN---YDRGDMFTNYLKGTHELLLKMPEDVTFMARGTWIRDFAATDTTGT 126
           Q    +   DL+   Y +GD  +  +KG HEL LK  E+    ARG +  D    D  G 
Sbjct: 93  QPGSYSSNNDLSNLLYSQGDTTSEIVKGLHELSLKY-ENYGLFARGMYFYDRKLND--GN 149

Query: 127 LSFNTPESVGS-NGLSDDARDDLAFK-ARLLDLWVSKGFDV--GGQRVRARLGNQVINWG 182
             FN P +    +   D+   ++  K  RLLD +V   FD+  G   +  R+GNQV++WG
Sbjct: 150 YDFNDPLTGKEYDPCQDNRASEVQCKDIRLLDAFVYANFDLNDGANPLSIRVGNQVVSWG 209

Query: 183 ESLFVAGGINNTNAYDYQALARPGVQLKEAVLPAPMLSVASGLGSGVNVEAYYQFRWNKS 242
           ES  +A GI   N  D   L  PG +LKEA  P  M+  + G+   ++VEA+YQ+ W   
Sbjct: 210 ESTLIAHGIGEINPVDLNILNAPGAELKEAFRPQGMVWASLGITENLSVEAFYQYDWEPI 269

Query: 243 ELPPVGSYWSNTNALGEG----RGDYGFS------------------------------- 267
            +P  GS ++  +  G G        GF+                               
Sbjct: 270 WVPTPGSIFATNDFAGFGGYNQNAQLGFNANPDINLDFVMQEYQRLAGMIASGQTIPTQQ 329

Query: 268 -----------------EKDARDSGQWGLSL-RWQPEDSDINYGFYVMRYHDKLPSL--- 306
                            E+   + GQ+G+ L  + PE  D  +GFY M YH + P +   
Sbjct: 330 LVAMALAYPTKVTLVQDEQSPSNDGQYGIKLGYYAPELGDTEFGFYFMNYHSRRPLISGT 389

Query: 307 ------------------------RVAILDPNTFAAAPTWEYQENRMMYGVSANMPIGDW 342
                                   R  +L   +F+ A    Y E+  +YG S N  +GD 
Sbjct: 390 AADFSTGALLSDLAVLGQNAGDINRDLLLSLKSFSKAQI-VYPEDIKLYGFSFNTSLGDT 448

Query: 343 AVGTELSYRPKDSVMLNPVVDLCSS--------------NG--------------GKCWK 374
           +VG E+++R  + + ++ V  L +               NG              G   +
Sbjct: 449 SVGAEIAHRQDEPLQIDDVELLFAGMPQQLANAGIRPDFNGISQIDGVKPGDTVDGFIRR 508

Query: 375 DEKKFQWHLTGLYSFTPSNSPTLLDFTGASTGTLLSELVVIKYPGLHDEVNGEPLAPGLN 434
           D  + Q   T L+       PTL    G    T+L+E+  +    +HD        PG +
Sbjct: 509 DTTQAQATFTHLF------GPTL----GLDNLTMLAEVGGV---WIHD-------MPGFD 548

Query: 435 AWQLDPATAPKSRGDKTSSGI-------------NLDFSLTYD-------GTLLPGWQVT 474
             +L+     +S G+    GI               DF+  Y          L  G  ++
Sbjct: 549 ELRLNGPGTARSGGNPDMPGIIQALHNGPETNPFPTDFAWGYRLVAKAEFNNLFAGVNMS 608

Query: 475 PGVFYSRSLGGRTPNLSATFTEDASSMNLYLNFVRNPASWQISLNYAKFMGGETPYDQLY 534
           P + +S  + G TP+    FTE   S+ L LNF      W   L+Y  F GG    + + 
Sbjct: 609 PRMIFSHDVDGITPDPMFLFTEGRKSVALGLNF-EYQNRWGADLSYNNFFGGVGTTNAM- 666

Query: 535 RDRDYVGIAISRTL 548
            DRDY+   I  ++
Sbjct: 667 ADRDYISFNIKYSI 680