Pairwise Alignments

Query, 552 a.a., acetate permease from Pseudomonas putida KT2440

Subject, 533 a.a., sodium:solute symporter family protein from Methanococcus maripaludis S2

 Score =  116 bits (290), Expect = 2e-30
 Identities = 114/529 (21%), Positives = 218/529 (41%), Gaps = 49/529 (9%)

Query: 30  LNLHAIGMFMVFVLFTLCITWWAARRTRSTTDFYSAGGGIQGWQNGLALAGDYMSASTLL 89
           L L+ I +  + V+  L    W  + T S  D+   G  I  +   ++    ++S + ++
Sbjct: 4   LLLNVIVLIYLLVIGYLGYKGW--KGTSSAEDYMVGGRKIHPFVMAMSYGATFISTAAIV 61

Query: 90  GITALIYTSGMDG-YIYLIAFFAGWPVLLLLMTERLR----NLGRFTFADITSYRLDQGK 144
           G        GM   ++  +  F G  +  +   +R R    NL   TF ++ + R +   
Sbjct: 62  GFGGFSGLFGMSLLWLTFLNIFLGIFIAFVFFGKRTRKMGHNLNALTFPELLAKRFESKF 121

Query: 145 VRTMAAIGSLTVVCFYLVAQMVGAGQLIRLLFGLDYHIAVVIVGALMMLYVTFGGMVATT 204
           ++  + +     +  Y  A ++GA + I     + + +A+++   ++ +YV  GG+    
Sbjct: 122 IQWFSGLLIFCAMPIYAAAVLIGAARFIETTLNISFDVALLVFSIIIAVYVVMGGLKGVM 181

Query: 205 WVQIIKAFLLLVGGSLVLFLAMREFDFSYDALVSKAMDTHALGERLLAPGSL-------- 256
           +    +  ++  G   +LFL    +D       +    ++  G   L P +L        
Sbjct: 182 YTDAFQGTIMFFG---MLFLLYMTYDILGGVTTAHQAISNMSG---LVPANLASVGHAGW 235

Query: 257 -----LADPL---TALSLSLGLVFGTAGLPHILMRFFTVSDAREARKSVLYATGFIGYFF 308
                   P+      S+ LG+  G    P +++RF TV   RE  ++VL    FI    
Sbjct: 236 TSMPTFGSPMWWTIVSSIILGVGIGVLAQPQLIVRFMTVKSNRELNRAVLIGAVFILIAT 295

Query: 309 NVIFLLGLASIVIVSQQPKFFEGGEVGGKLLGGGN---MVVMHLAQAVGGNLLLGFLSAV 365
              +++G  S V           G    +    GN   ++ +++ +A+    +  FL ++
Sbjct: 296 GTAYVVGTLSNVYFMNTEGVLSIGATVSEAFPTGNSDSIMPLYINKAMPEWFIYIFLVSL 355

Query: 366 TFATILAVVSGLALAGASAIAHDLYARVIMKGAASEAQELRVTKLATLSLGLVAIALGIL 425
             A  ++ +S    A  ++I  D+Y  +  K   +    + +T+L  +   ++A  LG +
Sbjct: 356 -LAAAMSTISSQFHAQGTSIGRDVYETICGKKGLN---SVIITRLGIIVAIVIAAILGYI 411

Query: 426 FENINVAFMVALAFGIAASANFPVLFLSMFWSGLTTRGALAAGYVGLLSAMGFVVF---- 481
                VA   AL FG+ ++A  P   L +FW   T  GA+A    G   ++  +VF    
Sbjct: 412 LPGGIVARGTALFFGLCSAAFLPAYALGLFWKRTTKEGAIAGLLTGTFVSLFCLVFIHQA 471

Query: 482 --------SKLVWVDVLHFAEPLFPYTQPALFSMPLAFLVAYAVSRMDR 522
                     L+  DVL  A P +PY  P + S+PLAF+    VS + +
Sbjct: 472 ESAALGISKMLIGRDVLISAMP-WPYVDPMVISLPLAFIATVIVSLLTK 519