Pairwise Alignments

Query, 552 a.a., acetate permease from Pseudomonas putida KT2440

Subject, 492 a.a., sodium/proline symporter PutP from Methanococcus maripaludis S2

 Score =  137 bits (346), Expect = 7e-37
 Identities = 135/508 (26%), Positives = 230/508 (45%), Gaps = 54/508 (10%)

Query: 31  NLHAIGMFMVFVLFTLCITWWAARRTRSTTDFYSAGGGIQGWQNGLALAGDYMSASTLLG 90
           NL  + +F++++L  + +  +  RR  + +D+   G  +  W   L+     MS   L+G
Sbjct: 5   NLSIVLVFILYLLVVMGVGMYFYRRNETISDYVLGGRKLNSWVAALSAQASDMSGWLLMG 64

Query: 91  ITALIYTSGMDGYIYLIAFFAGWPVLLLLMTERLRNLGRFTFADIT-------SYRLDQG 143
           +  + Y SGM      +    G  +    + ERLR         IT        +R    
Sbjct: 65  LPGVAYLSGMSEIWIGVGLAIGTYLNWKFVAERLRRYTEIAKDSITIPVYLENRFRDQSK 124

Query: 144 KVRTMAAIGSLTVVCFYLVAQMVGAGQLIRLLFGLDYHIAVVIVGALMMLYVTF-GGMVA 202
            +R ++A   +     Y  + +V  G+L  L+FG+DY +AV I GAL+++  TF GG +A
Sbjct: 125 LLRIVSAFFIMLFFLLYTSSGLVAGGKLFNLVFGVDYTLAVTI-GALVIIGYTFLGGFLA 183

Query: 203 TTWVQIIKAFLLLVGGSLVLFLAMRE---FDFSYDALVSKAMD-----THALGERLLAPG 254
            +W   I+  L+ +   L+  + + +    D + +A  S + D     T+  GE L   G
Sbjct: 184 VSWTDFIQGSLMFIAIFLIPIMGISQVGGIDATMNAWNSISPDYLNPFTNLDGESLGIMG 243

Query: 255 SLLADPLTALSLSLGLVFGTAGLPHILMRFFTVSDAREARKSVLYATGFIGYFFNVIFLL 314
                   A +L+ GL  G  G+PHIL+RF  +  A +  K+   AT ++     +  L+
Sbjct: 244 -------LASALAWGL--GYFGMPHILVRFMAIKSADKVPKARKIATTWVVISLFMAVLV 294

Query: 315 GLASIVIVSQQPKFFEGGEVGGKLLGGGNMVVMHLAQAVGGNLLLGFLSAVTFATILAVV 374
           G+   V +             G  L     V M +AQ +  +L+ G   A   A I++  
Sbjct: 295 GMVGAVAL-------------GAPLDDPEHVFMAMAQGLFPSLIAGLFLAGVLAAIMSTA 341

Query: 375 SGLALAGASAIAHDLYARVIMKGAASEAQELRVTKLATLSLGLVAIALGILFENINVAFM 434
               L  ASAI  D+YA  ++   AS+ + L +++ A + +  +A    I+    +V  +
Sbjct: 342 DSQLLVTASAITEDIYA--LLNKNASQKELLWISRFAVIVVAAIAYYFAIV-PGSSVMGL 398

Query: 435 VALAFGIAASANFPVLFLSMFWSGLTTRGALAAGYVGLLSAMGFVVFSKLVWVDVLHFAE 494
           V+ A+     A  PV+ LS++W  +T  GALA    GLLS  GF+V   ++W ++     
Sbjct: 399 VSYAWAGFGGAFGPVILLSLYWKRMTRNGALA----GLLSG-GFMV---ILWKNLSGGIF 450

Query: 495 PLFPYTQPALFSMPLAFLVAYAVSRMDR 522
            L+      L    LA ++   VS MD+
Sbjct: 451 DLYEIVPAFL----LASVMITVVSLMDK 474