Pairwise Alignments

Query, 552 a.a., acetate permease from Pseudomonas putida KT2440

Subject, 477 a.a., sodium:solute symporter from Methanococcus maripaludis S2

 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 89/443 (20%), Positives = 186/443 (41%), Gaps = 42/443 (9%)

Query: 54  RRTRSTTDFYSAGGGIQGWQNGLALAGDYMSASTLLGITALIYTSGMDGYIY-------- 105
           +R +  +DF   G  +  W +  +    Y SA   +G       +G  G+ +        
Sbjct: 11  KRIKGVSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGF------AGKMGWSFGIPTMWIV 64

Query: 106 ----LIAFFAGWPVLLLLMTERLRNLGRFTFADITSYRLDQGKVRTMAAIGSLTVVCFYL 161
               +I  F  W VL     E  + LG  T       R     + ++ A     ++ F+L
Sbjct: 65  VGNTIIGSFLAWQVLGKKTREMTQRLGASTMPSFLEKRYKSKNLESLTAF----IIFFFL 120

Query: 162 VAQMVGAGQLIRLLF---GLDYHIAVVIVGALMMLYVTFGGMVATTWVQIIKAFLLLVGG 218
           V       + +  LF   G+    A +++ AL  +Y+ FGG +A T    ++  ++++G 
Sbjct: 121 VPYSASIYKGLNFLFEGFGISPMNAYILMAALTAIYLYFGGFIAATLADFVQGCIMVIGV 180

Query: 219 SL-VLFLAMREFDFSYDALVSKAMDTHALGERLLAPGSLLADPLTALSLSLGLVFGTAGL 277
            L V FL        +  ++S   +  ++   L+ P +  A  +  + L+L    G+ GL
Sbjct: 181 LLMVFFLGSNPEVGGFSGMLS---NLSSIDPMLVTPIN-EASFIPIMGLALLTSIGSWGL 236

Query: 278 PHILMRFFTVSDAREARKSVLYATGFIGYFFNVIFLLGLASIVIVSQQPKFFEGGEVGGK 337
           P ++ +F+T+   + A  +   +T F       I   G A I  VS+   + +       
Sbjct: 237 PQMIHKFYTIKSEKAAVSAKWVSTAFA-----FIITFGAAYIGTVSRL-FYPDAASKAAA 290

Query: 338 LLGGGNMVVMHLAQAVGGNLLLGFLSAVTFATILAVVSGLALAGASAIAHDLYARVIMKG 397
            L   +M+V  + +    + +   +  +  +  ++ ++ L LA +S ++ D + +  +K 
Sbjct: 291 GLTSPDMIVPKIMEIALPDWVAALILVLVISASMSTLASLVLASSSVVSID-FVKGRLKT 349

Query: 398 AASEAQELRVTKLATLSLGLVAIALGILFENINVAFMVALAFGIAASANFPVLFLSMFWS 457
             S+   + + +L  +   +++  L I+  N  V  ++AL++G+ +       FL ++W 
Sbjct: 350 DLSDKNTMILMRLLCVLFVVLSFILAIV-PNSYVLSLMALSWGLVSGCLLAPYFLGLYWK 408

Query: 458 GLTTRGALAAGYVGLLSAMGFVV 480
             T  G     + G+ SA+  ++
Sbjct: 409 RTTKEGV----WAGITSALAIML 427