Pairwise Alignments

Query, 552 a.a., acetate permease from Pseudomonas putida KT2440

Subject, 515 a.a., sodium/solute symporter family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  508 bits (1307), Expect = e-148
 Identities = 271/527 (51%), Positives = 350/527 (66%), Gaps = 14/527 (2%)

Query: 20  PSLDAGQRQPLNLHAIGMFMVFVLFTLCITWWAARRTRSTTDFYSAGGGIQGWQNGLALA 79
           P   +   QP N  +I  F  FV FTL ITW+AARR+RS ++FY+AG  + G QNGLALA
Sbjct: 2   PEFTSTLGQP-NAVSILFFFAFVAFTLAITWFAARRSRSASEFYAAGRSVTGLQNGLALA 60

Query: 80  GDYMSASTLLGITALIYTSGMDGYIYLIAFFAGWPVLLLLMTERLRNLGRFTFADITSYR 139
           GDYMSA++ LGI  L+   G DG IY I F  GWP+++ L+ E LRNLGR+TFAD+ +YR
Sbjct: 61  GDYMSAASFLGIAGLVSLKGYDGLIYSIGFLVGWPLMMFLIAEPLRNLGRYTFADVVAYR 120

Query: 140 LDQGKVRTMAAIGSLTVVCFYLVAQMVGAGQLIRLLFGLDYHIAVVIVGALMMLYVTFGG 199
           L Q  +R  AA GSL  VCFYL+AQMVG+G L++L+FG+ Y  AVV VG +MM YV FGG
Sbjct: 121 LRQKPIRIAAACGSLMTVCFYLIAQMVGSGALVQLMFGIRYEYAVVAVGFIMMAYVLFGG 180

Query: 200 MVATTWVQIIKAFLLLVGGSLVLFLAMREFDFSYDALVSKAMDTHALGERLLAPGSLLAD 259
           M+ATTWVQI KA LLL G + ++ + + +FD+S   L   A   H  GE +LAPG L+++
Sbjct: 181 MLATTWVQITKAVLLLGGATAMVVMVLAQFDYSPTRLFVTAAAKH--GEAMLAPGGLVSN 238

Query: 260 PLTALSLSLGLVFGTAGLPHILMRFFTVSDAREARKSVLYATGFIGYFFNVIFLLGLASI 319
           P  A+SL + L+FGTAGLPHILMRF+TV DAR ARKSV YATG I YF+ + F++G  ++
Sbjct: 239 PWDAISLGMALMFGTAGLPHILMRFYTVPDARAARKSVFYATGLISYFYVLTFIIGFGAM 298

Query: 320 VIVSQQPKFFEGGEVGGKLLGGGNMVVMHLAQAVGGNLLLGFLSAVTFATILAVVSGLAL 379
           ++V        G +       GGNM    LA+  GG + LGF++AV FATILAVV+GL L
Sbjct: 299 MLV--------GPDAIRMFDKGGNMAAPLLAEVTGGTMFLGFIAAVAFATILAVVAGLTL 350

Query: 380 AGASAIAHDLYARVIMKGAASEAQELRVTKLATLSLGLVAIALGILFENINVAFMVALAF 439
           AGA+  +HDLYA V   G ++EA E+RV K AT++LG++A+ LGI F+  NVAFMV LAF
Sbjct: 351 AGATTFSHDLYANVFKGGQSNEADEVRVAKRATIALGVIAMLLGIAFKGQNVAFMVGLAF 410

Query: 440 GIAASANFPVLFLSMFWSGLTTRGALAAGYVGLLSAMGFVVFSKLVWVDVLHFAEPLFPY 499
            IAASAN P L LS+ W G +T GA+ A   G + A+G ++ S  VW DV H     FP 
Sbjct: 411 AIAASANLPALLLSIMWRGCSTTGAVWAIVTGGVLAVGLIIVSPTVWTDVFHLGTAPFPL 470

Query: 500 TQPALFSMPLAFLVAYAVSRMDRTARAKAERAAFADQFVRGQTGLGA 546
             PAL SMP AF+   A S +   +    E A F  Q +R   G+GA
Sbjct: 471 KNPALLSMPAAFMAGIAGSLLRPDSE---ESARFDAQKIRNYLGVGA 514