Pairwise Alignments

Query, 376 a.a., 4-hydroxypentanoyl-CoA kinase, subunit LvaA (from data) from Pseudomonas putida KT2440

Subject, 355 a.a., Predicted aminoglycoside phosphotransferase from Pseudomonas fluorescens FW300-N2E2

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 73/278 (26%), Positives = 100/278 (35%), Gaps = 20/278 (7%)

Query: 109 DREQEFAVLQVVYQAGVKVPRPLWLCRDVRVHGRVFFLMEYVPGSAAGRALSTGAG-PQG 167
           D  +EF +L  + +A    P+    C D  V G  F++ME V G      L    G    
Sbjct: 75  DMGREFRILNQLREAFPYCPKAYVHCTDESVMGAEFYVMERVKGIILRSDLPPELGFDAA 134

Query: 168 RAQ-LATQLGANLARLHQVRPPCATLCFLSVPDSSPALATIDAYRRYLDTLADAYPVLEW 226
           R + L       L  LH+V      L  L  P+   A        RY   L    P  E 
Sbjct: 135 RTEALCKSFIDRLVELHRVDYNACGLADLGKPEGYVARQIRGWSDRYEKALTPDAPKWEA 194

Query: 227 GLRWCELHAPRSS-TLCLLHRDYRTGNYLASEEG---LEAVLDWEFTGWGDPCEDLG--- 279
              W     P    T  ++H DYR  N +   E    +  VLDWE T  GDP  DLG   
Sbjct: 195 VKAWLNDKMPADHPTSSIVHNDYRFDNVILDPENPMQIIGVLDWELTTIGDPLMDLGNSL 254

Query: 280 --WF----TARCWRFTRPDLEAGGIGQLEDFLRGYHEVSSLCIERSRLHYWQVMATLRWA 333
             W      A      R    A G+    +F+  Y E + + I+    +Y       R A
Sbjct: 255 AYWIEADDPAPVQLMRRQPSHAPGMLTRREFVDYYAERAGIRIDNFDFYY--TYGLFRLA 312

Query: 334 VIALQQGQRHLSGEEPSLELALTA---RLLPELELDIL 368
            I  Q   R   G+      A      +LL ++ L ++
Sbjct: 313 GIVQQIYYRFFHGQTQDKRFAQFVQMNKLLEQMSLQVI 350