Pairwise Alignments

Query, 376 a.a., 4-hydroxypentanoyl-CoA kinase, subunit LvaA (from data) from Pseudomonas putida KT2440

Subject, 351 a.a., Possible acyl-CoA dehydrogenase FadE36 from Mycobacterium tuberculosis H37Rv

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 55/213 (25%), Positives = 84/213 (39%), Gaps = 49/213 (23%)

Query: 94  WVLRSDALSAL-PASLDREQEFAVLQVVYQAGVKVPRPLWLCRDVRVHGRVFFLMEYVPG 152
           W++R   L  L P++ D  +E+ V+  +    V V R + LC+D  V G  F ++E+V G
Sbjct: 53  WLVRRPPLHGLTPSAHDMAREYRVVAALGDTPVPVARTISLCQDDSVLGAPFQVVEFVAG 112

Query: 153 SAAGR-----ALSTGAGPQGRAQLATQLGANLARLHQVRPPCATLCFLSVPDSSPALATI 207
               R     AL + +  +G      ++   L  LH + P    L     PD        
Sbjct: 113 QVVRRRAELEALGSRSVIEGCVDALIRV---LVDLHSIDPKAVGLSDFGKPDG------- 162

Query: 208 DAYRRYLDTLADAYPVLEWGLRW--------------CELH------APRSSTLCLLHRD 247
                YL+       V  WG +W                LH       P+ S   ++H D
Sbjct: 163 -----YLER-----QVRRWGSQWELVRLPDDHRDADISRLHLALQQAIPQQSRTSIVHGD 212

Query: 248 YRTGNYLASEEG---LEAVLDWEFTGWGDPCED 277
           YR  N +   +    + AV+DWE +  GDP  D
Sbjct: 213 YRIDNTILDTDDPCHVRAVVDWELSTLGDPLSD 245