Pairwise Alignments

Query, 869 a.a., putative Transporter from Pseudomonas putida KT2440

Subject, 771 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  120 bits (301), Expect = 3e-31
 Identities = 134/646 (20%), Positives = 267/646 (41%), Gaps = 47/646 (7%)

Query: 215 MVGGVVSADKKVAMVVAELGTKQDDAQAQLR----AYHQVREIIAKYQAAHPEFTDEVFI 270
           +VG +++ D   AMV A+L          L     A    +E+  KY+      TD+V I
Sbjct: 156 IVGRLIANDYSAAMVSAQLMDFDPQTGKPLDTIAFAAQLEKELRGKYE------TDKVKI 209

Query: 271 AGMPIFIAAQQEIIDHDLAMLFPIVFLLVTSLLVFFFRKPLGV-VLPLFNILFCTIWTLG 329
             +     A          +LF ++ +LVT+ +V+ F K + + +LPL   L   IW LG
Sbjct: 210 HIIGFAKMAGDVADGAKGVLLFFVIAILVTAAMVYLFSKSIILTLLPLICSLAAVIWQLG 269

Query: 330 LMALLRVPMDLLTSVLPVFLFTICCADAIHVMAEYYEQLNSGKSFREANRETQRLMVTPV 389
           L+ ++   +D ++ ++P  +F I  +  + ++     ++  G+S + A+    R ++ P 
Sbjct: 270 LLTVIGFGLDPMSILVPFLVFAIGVSHGVQIINAVKRRVMDGQSTKAASASAFRSLLVPG 329

Query: 390 VLTTVTTIATFLISTTNNIVSIRNFGVFMSIGLTAALIISLLLIPAWISIWGKDAVPR-- 447
            +  ++    F+     +I  IR   +  S+G+   ++ +L+L+P  IS    +  P+  
Sbjct: 330 GVALLSDTVGFITLLFIDIGIIRELAISASLGVGVIILTNLILLPLVISFTEINVPPQGQ 389

Query: 448 --KVQLKESLISHYLVVFCAWLIRWRKPVLLVTLPL--LAMMTVFTFKVDIEDSGIAYFK 503
               +++   I  YL  F     ++   V++ T+ L    +      K+     G     
Sbjct: 390 PTSDEVRAEAIWRYLAKFAT--PKYAIVVIIATIALYFAGLEKANQMKIGDLQGGAPALH 447

Query: 504 KDSPVRMSDEFINRAGVAGTSPGWIAFDTKTPRGALTTETVQFLDRLDQFIKAQPNVSYT 563
           +DS   +   FI       T    +  +  +P      + +  +D  +  ++  P V  T
Sbjct: 448 QDSRYNLDTFFITDHFSITTDVMTVIVEA-SPEACTYHDVLNQIDEFEWLVRNTPGVEST 506

Query: 564 YSVATYIKRMNLVLNDMNPAFLRVPQAVEQVTVVDDDGKPETFDVDGNSLIEQHIMMFEN 623
            S+A+  K++N   N+ NP +  +P+     ++V   G+  T                  
Sbjct: 507 VSLASVAKKVNAGFNEGNPRWEVLPRTT--ASLVQAIGQIPT------------------ 546

Query: 624 GGGTDLQNVLNADYSKAVTLFTMTSSVAGDYQAMLDKLDAWLAINKPANLQVTHAGTPY- 682
                   +LN D S       M    A   + ++ K+ A  A      LQ   A  P  
Sbjct: 547 -----TSGLLNGDCSVMPVYLFMKDHKAETIETVVAKVKAVAAKMDNDKLQFKLASGPVG 601

Query: 683 IWTGVLQEITQGQVLSFSLALLAVTLMMMFWLKSVRLGILGMLTLLTTSVTVYGSMYLLD 742
           +     + + + Q+        AV ++ +   KS +  +  ++ L   S      M +L+
Sbjct: 602 VMAATNEAVAEAQLPMMIYVYGAVFVLCLISFKSFKATVAVIIPLYVVSTLAQALMTMLN 661

Query: 743 IELNIGTTLVTFLVVGV-VDYAVHLLSRIKMLVQKGIEIDEAILAAMQGVGRSTVVNVVI 801
           I L + T  V  L VG+ VDY +++LS +   +  G+ + +A   A+   G + +   + 
Sbjct: 662 IGLAVSTLPVIALGVGIGVDYGIYILSTMSSKLSNGMPVQQAYYEALVERGSAVIFTGLT 721

Query: 802 FSMGFVALLFSAYKPVIDLGVLVILALSSSGFMTILLVTLISPWFF 847
            ++G     FSA K  +D+G+L+      +    I+++  ++  F+
Sbjct: 722 LAIGVSTWFFSALKFQMDMGILLTFMFLVNMLGAIIILPALAAVFW 767