Pairwise Alignments

Query, 307 a.a., Homocysteine S-methyltransferase family protein from Pseudomonas putida KT2440

Subject, 1226 a.a., methionine synthase from Vibrio cholerae E7946 ATCC 55056

 Score = 60.1 bits (144), Expect = 3e-13
 Identities = 80/332 (24%), Positives = 128/332 (38%), Gaps = 56/332 (16%)

Query: 8   LLDGGMGRELKRI--------GAPFRQPEWSA-------LALFEAPEYVTQVHRAFIAAG 52
           L+DGGMG  ++          GA F   +W         L +   P+ + ++H A++ AG
Sbjct: 19  LIDGGMGTMIQSYKLQEEDYRGARF--VDWHCDLKGNNDLLVLTQPQIIKEIHSAYLEAG 76

Query: 53  ARVITTNSYAVVPFHIGEERFARSGRALAELSGRLARGAADEAGASVQ-----VAGSLPP 107
           A ++ TN++      + +         +   + +LAR  ADE  A        VAG L P
Sbjct: 77  ADILETNTFNSTTIAMADYDMQSLSAEINFAAAKLAREVADEWTAKDPSRPRYVAGVLGP 136

Query: 108 A--LGSYRPDLFDPARSQAIHRELICGLTPHV--------DFWLAETQSSLAEARAVHAA 157
                S  PD+ DP         L+   +           D  L ET      A+A   A
Sbjct: 137 TNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGGSDLILIETIFDTLNAKACAFA 196

Query: 158 LDGDGKPLWLSFTLLDPDTEHAVPLLRSGESVQQAVLLALELGASALLFNCSQ---PESM 214
           +D   + L +S           +P++ SG ++  A    L    +   +N  +   P S 
Sbjct: 197 VDSVFEELGIS-----------LPVMISG-TITDASGRTLSGQTTEAFYNALRHVRPISF 244

Query: 215 GAALRSARQVLKQEARELAL--GVYANAFPPVREDAQANDTLLDIRADLGPEAYLQWAQQ 272
           G         L+Q   EL+     Y +A P         +       DL  E   +   +
Sbjct: 245 GLNCALGPDELRQYVEELSRISECYVSAHPNAGLPNAFGEY------DLSAEEMAEHIAE 298

Query: 273 WVEEG-ADIVGGCCGIGPEHIARLDEHLQACK 303
           W + G  ++VGGCCG  PEHIA + + ++  K
Sbjct: 299 WAQAGFLNLVGGCCGTTPEHIAAIAKAVEGVK 330