Pairwise Alignments

Query, 348 a.a., putative glycine betaine/L-proline ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 314 a.a., Substrate-binding region of ABC-type glycine betaine transport system from Pseudomonas syringae pv. syringae B728a

 Score = 48.9 bits (115), Expect = 2e-10
 Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 11/205 (5%)

Query: 9   LAGFALLAALVPATASFAKDKIVIGEQNWTGAIAIQYILGDIISNRLDGEVSYLAGDLPI 68
           L   ALL++ V A  + +   + +G  NWT  IA    +  ++ + L  +    +    I
Sbjct: 12  LGASALLSSNVMAVDAASCQNVRMGVVNWTDVIATS-AMTQVLLDGLGYKTKQTSASQQI 70

Query: 69  LFAAAAKGDGSVDVLTDIWLPNQSAAFAKYVTGGTHSLIPNKQPYVGVQGFYIPGYIQDK 128
           +FA     D  +D+    W P  +   A +V      ++             +P Y+ DK
Sbjct: 71  IFAGIR--DQRLDLFLGYWNPLMTQTIAPFVEARKVKVLDKPSLEDARATLAVPTYLADK 128

Query: 129 YNVKSVYDLKKPEVAKLFAPLGGGKSQLLVGPAGWESTYIGQIKAKDFGFDGNFESVSTE 188
             +KS  D+ +      F    GGK   +   +G  +     I    FG  G F+ V + 
Sbjct: 129 -GLKSFADIAR------FEKELGGKIYGIEPGSGANTQIKAMIAKNQFGL-GKFQLVESS 180

Query: 189 ASVTYAKLDAAYKAERGVIFYAYTP 213
            +   A +D A + +  V+F+ +TP
Sbjct: 181 EAGMLAAVDRAVRRKEAVVFFGWTP 205