Pairwise Alignments

Query, 348 a.a., putative glycine betaine/L-proline ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 314 a.a., amino acid-binding periplasmic protein from Sinorhizobium meliloti 1021

 Score =  123 bits (308), Expect = 7e-33
 Identities = 99/327 (30%), Positives = 146/327 (44%), Gaps = 27/327 (8%)

Query: 13  ALLAALVPATASFAKDKIVIGEQNWTGAIAIQYILGDIISNRLDGEVSYLAGDLPILFAA 72
           A LA  V A A+ A   +VI    W    A   IL   I+ +   E      +L  L A 
Sbjct: 11  AALALAVAAPAAAAD--LVIAMPPWPSGQAAANILKLGIAKKFSLEAE--VRELGTLTAF 66

Query: 73  AAKGDGSVDVLTDIWLPNQSAAFAKYVTG-GTHSLIPNKQPYVGVQGFYIPGYIQDKYNV 131
                G VD+  ++W PN      K+VT  G  +L     P    QG  I    +    +
Sbjct: 67  IGLEKGEVDIQPEVWRPNFDELVRKFVTEKGVVTLSERAVP--AWQG--ICATPEAAATI 122

Query: 132 KSVYDLKKPEVAKLFAPLGGGKSQLLVGPAGWESTYIGQIKAKDFGFDGNFESVSTEASV 191
           KSV DL  P   K+    G G+ ++ +G A W ST I + +A  +G+  N   V  +  V
Sbjct: 123 KSVADLGDPAKTKILDTDGDGRGEMWIGAAEWLSTGIERARAAGYGYAANLTLVEAKEEV 182

Query: 192 TYAKLDAAYKAERGVIFYAYTPDWIFSAYDLRRLDEPPFDGYAQDNKKGDPLYKADGCWK 251
             A +DAA    R ++FY Y P  +F  + + RL+EPP D                  WK
Sbjct: 183 AMAAVDAAIATARPMVFYCYAPHHVFKLHQISRLEEPPHD---------------PAKWK 227

Query: 252 FISPTVDADWLNKSSITCAYPDAKVHILASSALRQRAPRIAAFLENVSIDPASLNDLILK 311
            I+P  D  W++KSS   A+   +  I  ++A  ++ P +A FL+ V   P  +  +   
Sbjct: 228 -IAPPNDPLWVSKSSAATAWDAGQFQIGYATAFAKKHPEVAQFLQKVDFSPDEVTAMSYA 286

Query: 312 IEREKQ-PADAAAKAWVAANQATVDRW 337
           +E E+Q PAD A K WV ++   +D W
Sbjct: 287 LEVERQAPADYARK-WVESHAERIDGW 312